Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 DYNLL1P4-201ENST00000549314 266 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AL121821.2-201ENST00000556081 394 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 NIFKP8-201ENST00000560500 874 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 BNIP3P22-201ENST00000593399 556 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC091488.1-201ENST00000604239 660 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 BNIP3P10-201ENST00000605360 577 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 MIR7151-201ENST00000617477 60 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC079228.1-201ENST00000624774 1049 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 MTCO1P9-201ENST00000505577 1534 ntBASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5□□□□□ -1.61
SH3RF3Q8TEJ3 AC104118.1-201ENST00000607625 1589 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 DCAF13P3-201ENST00000561147 1334 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 GTF2H2B-203ENST00000508065 1432 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 NOL8P1-201ENST00000508336 3529 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 SNORD81.2-201ENST00000365153 76 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 RNU1-64P-201ENST00000365443 163 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 Y_RNA.409-201ENST00000383990 98 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 SNORA75.4-201ENST00000391278 119 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AP000357.1-201ENST00000409926 1165 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 FCF1P2-201ENST00000415284 583 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC108032.1-201ENST00000416706 207 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 HMGB3P20-201ENST00000417997 600 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AL009174.1-201ENST00000426577 416 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 FO393419.3-201ENST00000428741 282 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 SAR1AP4-201ENST00000429225 591 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 RPS26P30-201ENST00000443431 335 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC104687.1-201ENST00000485829 412 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 SNX5P1-201ENST00000505757 1041 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC022447.3-201ENST00000506865 495 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC134698.5-201ENST00000519444 336 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 ARL2BPP5-201ENST00000523141 481 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AL355836.1-201ENST00000555951 870 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AP001004.1-201ENST00000582468 324 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC011373.1-201ENST00000607270 237 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC093788.1-201ENST00000609356 927 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 MIR6875-201ENST00000617506 72 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC068880.5-201ENST00000624331 290 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC138915.3-201ENST00000562908 1389 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 AC066616.2-201ENST00000559334 1481 ntBASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SH3RF3Q8TEJ3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 AC114546.3-201ENST00000623582 1734 ntBASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SH3RF3Q8TEJ3 RNU6-845P-201ENST00000362578 103 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms