Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 AC111000.2-201ENST00000507775 550 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 RNU6-491P-201ENST00000516099 110 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 MIR5092-201ENST00000583139 88 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 AC024153.1-201ENST00000603103 365 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 AL110115.1-201ENST00000614396 364 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 RNU6-50P-201ENST00000362356 103 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 MIR421-201ENST00000365696 85 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 RNA5SP210-201ENST00000391034 120 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 USP9YP36-201ENST00000424581 829 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC005189.1-201ENST00000431286 310 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC112220.1-201ENST00000434628 355 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC129850.1-201ENST00000436203 508 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AL109741.2-201ENST00000455561 343 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 PCNAP1-201ENST00000505363 709 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 MTCYBP37-201ENST00000510642 1133 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC008494.2-201ENST00000514544 370 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 HSPE1P20-201ENST00000538133 289 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 MIR4298-201ENST00000584380 73 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 ELOCP29-201ENST00000588193 334 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC096947.1-201ENST00000603233 470 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 DUXAP3-201ENST00000603616 594 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AL137847.3-201ENST00000611521 109 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AL391597.1-201ENST00000618707 694 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC112Q8NEF3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC233728.2-201ENST00000425348 757 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC010301.1-201ENST00000473936 355 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC004924.1-201ENST00000480160 781 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 RPL23AP94-201ENST00000512518 302 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 RNA5SP468-201ENST00000516782 93 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC004923.2-201ENST00000529649 369 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 MIR4635-201ENST00000583759 79 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC006023.1-201ENST00000603944 259 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC091046.2-201ENST00000620775 665 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 AC006963.1-201ENST00000624003 1052 ntBASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC112Q8NEF3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.94
CCDC112Q8NEF3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC112Q8NEF3 RNU1-109P-201ENST00000383960 147 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 UBE2V1P2-201ENST00000397758 440 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AC073508.1-201ENST00000428866 656 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 XKRYP6-201ENST00000440468 1116 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 XKRYP3-201ENST00000442113 1116 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AC009961.3-201ENST00000449832 765 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AL035407.2-201ENST00000454090 378 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms