Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SNORA67.3-201ENST00000384366 140 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 RPS3AP26-201ENST00000398259 784 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AC005189.1-201ENST00000431286 310 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 UBE2V2P1-201ENST00000434717 398 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 RAB9AP5-201ENST00000437794 597 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 RAB9AP2-201ENST00000443911 597 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AL591719.1-201ENST00000444669 744 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 VN1R96P-201ENST00000446052 858 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 snoU13.23-201ENST00000458863 104 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 TTC39CP1-201ENST00000512513 755 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AC245517.5-201ENST00000611529 162 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 SNORA50A-202ENST00000629536 136 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 MIR219B-201ENST00000637023 88 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AL512283.1-201ENST00000606756 1384 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 RNA5SP88-201ENST00000365560 109 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 SNORA26.7-201ENST00000391288 122 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 HMGB3P12-201ENST00000438745 556 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AC104435.1-201ENST00000483483 166 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS8Q8N3P4 AC007687.1-201ENST00000602704 304 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 YWHAEP7-203ENST00000622054 312 ntBASIC3.27□□□□□ -1.89
VPS8Q8N3P4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
VPS8Q8N3P4 AC007256.1-201ENST00000392253 2765 ntBASIC3.26□□□□□ -1.89
VPS8Q8N3P4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS8Q8N3P4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VPS8Q8N3P4 RPL21P2-201ENST00000440049 481 ntBASIC3.26□□□□□ -1.89
VPS8Q8N3P4 AC090543.1-201ENST00000492168 485 ntBASIC3.26□□□□□ -1.89
VPS8Q8N3P4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.26□□□□□ -1.89
VPS8Q8N3P4 EEF1A1P37-201ENST00000522748 715 ntBASIC3.26□□□□□ -1.89
VPS8Q8N3P4 OR5D17P-201ENST00000531492 978 ntBASIC3.26□□□□□ -1.89
VPS8Q8N3P4 AP000867.2-201ENST00000532468 320 ntBASIC3.26□□□□□ -1.89
VPS8Q8N3P4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS8Q8N3P4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
VPS8Q8N3P4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS8Q8N3P4 GSTA9P-201ENST00000406231 611 ntBASIC3.25□□□□□ -1.89
VPS8Q8N3P4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.25□□□□□ -1.89
VPS8Q8N3P4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS8Q8N3P4 AC107222.1-201ENST00000510899 637 ntBASIC3.25□□□□□ -1.89
VPS8Q8N3P4 RNU2-58P-201ENST00000516403 183 ntBASIC3.25□□□□□ -1.89
VPS8Q8N3P4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS8Q8N3P4 AC120053.1-201ENST00000607706 736 ntBASIC3.25□□□□□ -1.89
VPS8Q8N3P4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS8Q8N3P4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS8Q8N3P4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS8Q8N3P4 AC022022.1-201ENST00000430304 178 ntBASIC3.24□□□□□ -1.89
VPS8Q8N3P4 AL445646.1-201ENST00000431784 216 ntBASIC3.24□□□□□ -1.89
VPS8Q8N3P4 MTND2P2-201ENST00000434633 945 ntBASIC3.24□□□□□ -1.89
VPS8Q8N3P4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS8Q8N3P4 AC087190.1-201ENST00000484462 480 ntBASIC3.24□□□□□ -1.89
VPS8Q8N3P4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS8Q8N3P4 HSPE1P18-201ENST00000517602 280 ntBASIC3.24□□□□□ -1.89
VPS8Q8N3P4 AC025881.1-201ENST00000518851 512 ntBASIC3.24□□□□□ -1.89
VPS8Q8N3P4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.24□□□□□ -1.89
VPS8Q8N3P4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VPS8Q8N3P4 MIR4524B-201ENST00000581569 115 ntBASIC3.24□□□□□ -1.89
VPS8Q8N3P4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS8Q8N3P4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS8Q8N3P4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 USP9YP8-201ENST00000441913 500 ntBASIC3.23□□□□□ -1.89
VPS8Q8N3P4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 RPS27P5-201ENST00000444247 244 ntBASIC3.23□□□□□ -1.89
VPS8Q8N3P4 MTND5P4-201ENST00000514978 288 ntBASIC3.23□□□□□ -1.89
VPS8Q8N3P4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 MIR4716-201ENST00000579628 84 ntBASIC3.23□□□□□ -1.89
VPS8Q8N3P4 AC009318.2-201ENST00000610917 651 ntBASIC3.23□□□□□ -1.89
VPS8Q8N3P4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VPS8Q8N3P4 DCAF13P3-201ENST00000561147 1334 ntBASIC3.23□□□□□ -1.89
VPS8Q8N3P4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 SEC11B-201ENST00000518383 499 ntBASIC3.22□□□□□ -1.89
VPS8Q8N3P4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 AL354950.1-201ENST00000614150 568 ntBASIC3.22□□□□□ -1.89
VPS8Q8N3P4 AC009318.3-201ENST00000616916 503 ntBASIC3.22□□□□□ -1.89
VPS8Q8N3P4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms