Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC137800.2-201ENST00000574375 120 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 MIR4700-201ENST00000578311 74 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 MIR4307-201ENST00000582802 84 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC067852.4-201ENST00000590314 478 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC114781.5-201ENST00000615297 108 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AL391261.4-201ENST00000616012 481 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AL139089.1-201ENST00000620372 975 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 OR5AK4P-201ENST00000635912 903 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 OR11H4-201ENST00000315409 1082 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 RNY4P24-201ENST00000362735 96 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 RN7SKP226-201ENST00000364912 300 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 RNA5SP366-201ENST00000365454 123 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 SNORA51.6-201ENST00000384151 125 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 RNU6-952P-201ENST00000391164 108 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 EIF5P1-201ENST00000400019 1231 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 DHFRP6-201ENST00000401776 268 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 RPS4XP9-201ENST00000405151 780 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL023807.1-201ENST00000407932 359 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 RNU6-248P-201ENST00000410720 107 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 RPS3AP9-201ENST00000417027 792 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 Z97055.1-201ENST00000419730 712 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC096632.1-201ENST00000427395 310 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL139415.2-201ENST00000431968 163 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 MTND5P14-201ENST00000441481 1267 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 ARPC3P5-201ENST00000448802 534 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 PAXBP1P1-201ENST00000449315 447 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 NDUFS5P3-201ENST00000450668 321 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL590365.1-201ENST00000450788 243 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 OR6K1P-201ENST00000456766 971 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 RPL36AP13-201ENST00000457490 317 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC026410.2-201ENST00000460281 156 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC010342.1-201ENST00000514047 877 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC016065.2-201ENST00000514530 444 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 DEFB108A-201ENST00000530110 222 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC022878.1-201ENST00000530684 149 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC234778.2-201ENST00000566241 354 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 MIR4504-201ENST00000577413 92 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 MIR4277-201ENST00000578298 84 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 MIR4330-201ENST00000579077 105 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC012417.1-201ENST00000582307 1039 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC022916.3-201ENST00000592961 742 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL136295.6-201ENST00000610486 658 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC131902.3-201ENST00000611767 581 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC008250.2-201ENST00000615261 205 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC108479.2-201ENST00000617314 601 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL773545.4-201ENST00000637262 310 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AL513478.4-201ENST00000641636 310 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 AC006378.2-201ENST00000623178 2476 ntBASIC3.78□□□□□ -1.8
CLIP4Q8N3C7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 AC116667.1-201ENST00000604855 2072 ntBASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.77□□□□□ -1.81
CLIP4Q8N3C7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms