Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC006499.5-201ENST00000505037 514 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 RNU6-352P-201ENST00000516908 107 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC024909.2-201ENST00000553035 286 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC105429.2-201ENST00000610567 517 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC025588.4-201ENST00000615802 908 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC092192.1-201ENST00000633154 1018 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 ZNF285B-201ENST00000561698 1767 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AL390237.1-201ENST00000404226 1415 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AP002907.1-201ENST00000606361 1430 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 RNU6-761P-201ENST00000384148 107 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 MIR7-3-201ENST00000384898 110 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC083875.1-201ENST00000419509 405 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 RPL7P30-201ENST00000420888 709 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC008065.1-201ENST00000428525 348 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 RPL23AP74-201ENST00000437246 471 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 THAP5P1-201ENST00000439089 262 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 MTND1P30-201ENST00000441241 901 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 PPIAP3-201ENST00000450588 505 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 KATNBL1P6-201ENST00000453433 915 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 HMGB3P30-201ENST00000457863 606 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AP000873.1-201ENST00000463987 400 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 RPL30P9-201ENST00000465586 330 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AL136126.1-201ENST00000473603 402 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 TMED11P-201ENST00000479478 690 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 RNU6-150P-201ENST00000516237 95 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC092470.1-201ENST00000546187 132 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC007115.1-201ENST00000546853 234 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AL360157.1-201ENST00000565962 87 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AP001004.1-201ENST00000582468 324 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AC064872.1-201ENST00000604823 1072 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 HMGB1P50-201ENST00000605814 607 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AL356596.1-201ENST00000624230 379 ntBASIC4.25□□□□□ -1.73
VPS52Q8N1B4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS52Q8N1B4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
VPS52Q8N1B4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS52Q8N1B4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS52Q8N1B4 RNA5SP119-201ENST00000362715 117 ntBASIC4.24□□□□□ -1.73
VPS52Q8N1B4 RNA5SP97-201ENST00000365006 84 ntBASIC4.24□□□□□ -1.73
VPS52Q8N1B4 U8.11-201ENST00000384699 133 ntBASIC4.24□□□□□ -1.73
VPS52Q8N1B4 U8.12-201ENST00000384701 133 ntBASIC4.24□□□□□ -1.73
VPS52Q8N1B4 AC007066.1-201ENST00000392902 381 ntBASIC4.24□□□□□ -1.73
VPS52Q8N1B4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VPS52Q8N1B4 AL121972.1-201ENST00000402023 252 ntBASIC4.24□□□□□ -1.73
VPS52Q8N1B4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS52Q8N1B4 SNORA3.3-201ENST00000408712 125 ntBASIC4.24□□□□□ -1.73
VPS52Q8N1B4 PGBD4P8-201ENST00000412993 562 ntBASIC4.24□□□□□ -1.73
VPS52Q8N1B4 Z97055.1-201ENST00000419730 712 ntBASIC4.24□□□□□ -1.73
VPS52Q8N1B4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS52Q8N1B4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms