Protein–RNA interactions for Protein: Q6R2W3

ZBED9, SCAN domain-containing protein 3, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED9Q6R2W3 SNORA80E-201ENST00000384744 137 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 RNA5SP80-201ENST00000410475 111 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 RNA5SP492-201ENST00000411330 114 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 KLHL2P1-201ENST00000508691 521 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 SNORA31.11-201ENST00000516528 139 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 AC103881.1-201ENST00000603476 538 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 AC113194.1-201ENST00000606037 500 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 SNHG22-203ENST00000617833 660 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 AC092184.1-201ENST00000625042 715 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 AL049780.3-201ENST00000624612 1583 ntBASIC3.12□□□□□ -1.91
ZBED9Q6R2W3 ZNF720P1-201ENST00000562403 1939 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 SNORA67.4-201ENST00000384688 142 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 ARF4P3-201ENST00000397387 509 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AL031679.1-201ENST00000400616 525 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AL031663.1-201ENST00000437445 219 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 BUD31P2-201ENST00000449374 300 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AC026436.1-201ENST00000510537 270 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AL359535.1-201ENST00000612100 1087 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AC005858.4-201ENST00000623191 700 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 AC243829.7-201ENST00000633081 225 ntBASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZBED9Q6R2W3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 RNA5SP68-201ENST00000363885 119 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 ATG3P1-201ENST00000419507 911 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 AC018634.1-201ENST00000437554 401 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 ARL5AP2-201ENST00000444698 533 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 NPM1P49-201ENST00000448027 714 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 TPMTP4-201ENST00000450749 678 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 AC126389.1-201ENST00000477436 290 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 MTND3P6-201ENST00000485242 339 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 HMGB3P15-201ENST00000507326 574 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 AC011890.2-201ENST00000613393 294 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 MIR6817-201ENST00000615588 66 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 AC007342.9-201ENST00000623877 1385 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 AC002546.1-201ENST00000588041 2504 ntBASIC3.1□□□□□ -1.91
ZBED9Q6R2W3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 RPL21P132-201ENST00000331267 462 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 SNORA31-201ENST00000362607 130 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 SNORD114-30-201ENST00000364448 72 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 XGY1-201ENST00000381172 446 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 OR5H15-201ENST00000383696 930 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 RNU6-317P-201ENST00000384031 107 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AL356057.1-202ENST00000402263 756 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AL591416.1-201ENST00000404015 867 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 RPL23AP47-201ENST00000408017 460 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 UBE2V2P3-201ENST00000433562 437 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 RPL31P20-201ENST00000449593 360 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 MTND2P8-201ENST00000450555 1025 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AC110792.2-201ENST00000510278 224 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 RPL23AP94-201ENST00000512518 302 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 RN7SKP234-201ENST00000517173 224 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AC109329.2-201ENST00000519658 482 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AC090695.1-201ENST00000561269 1222 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AC234778.2-201ENST00000566241 354 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 MTCO3P24-201ENST00000572729 782 ntBASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.09□□□□□ -1.91
ZBED9Q6R2W3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
ZBED9Q6R2W3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms