Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU6-510P-201ENST00000391239 108 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RPL7P25-201ENST00000404151 721 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RPL31P52-201ENST00000407532 367 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RNA5SP296-201ENST00000410523 111 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 PRELID3BP11-201ENST00000414230 479 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AL590609.2-201ENST00000421430 368 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RPS15AP9-201ENST00000439856 381 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AL591623.2-201ENST00000449978 222 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 EIF4A1P11-201ENST00000451239 222 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 NDUFA5P7-201ENST00000452914 242 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AL590639.1-201ENST00000456484 337 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC090602.1-201ENST00000469695 252 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RPL21P126-201ENST00000470049 478 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-1170P-201ENST00000515974 106 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RN7SKP96-201ENST00000516948 297 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 FTH1P11-201ENST00000517577 551 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC100784.1-201ENST00000522790 310 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC011477.5-201ENST00000586571 259 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC104237.2-201ENST00000612456 443 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC063976.2-201ENST00000425667 3556 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-251P-201ENST00000363235 104 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 RNA5SP28-201ENST00000363841 119 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-331P-201ENST00000384724 107 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 RPL23AP32-201ENST00000395315 459 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AL590762.2-201ENST00000395798 571 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 RN7SKP58-201ENST00000411010 305 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC245054.2-201ENST00000415639 319 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 NUP35P1-201ENST00000422734 947 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AL358176.2-201ENST00000425769 204 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 RPS29P17-201ENST00000430795 166 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 SNRPEP7-201ENST00000438350 220 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 RPL23AP15-201ENST00000450202 459 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC027575.1-201ENST00000481064 460 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AP000827.1-201ENST00000527814 258 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC090502.2-201ENST00000549267 280 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC005668.1-201ENST00000571142 476 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 MIR3167-201ENST00000579623 85 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC016925.2-201ENST00000605108 242 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 ARF4P1-201ENST00000605447 541 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC091979.2-201ENST00000607514 214 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 ZYXP1-201ENST00000617638 118 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC009161.2-201ENST00000624626 138 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AL078596.1-201ENST00000624856 447 ntBASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.07□□□□□ -1.6
CNKSR3Q6P9H4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.06□□□□□ -1.6
CNKSR3Q6P9H4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms