Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1Q5Y7H0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1Q5Y7H0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1Q5Y7H0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DQA1Q5Y7H0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
HLA-DQA1Q5Y7H0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DQA1Q5Y7H0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1Q5Y7H0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1Q5Y7H0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC114947.2-201ENST00000565748 2125 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SKP113-201ENST00000363891 295 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 Y_RNA.187-201ENST00000363918 113 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU6-1078P-201ENST00000364522 103 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 SNORD115-7-201ENST00000365306 82 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU5E-6P-201ENST00000365574 115 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU6-639P-201ENST00000384074 107 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 SNORA24.1-201ENST00000384401 135 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RPS4XP9-201ENST00000405151 780 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNA5SP107-201ENST00000411358 122 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RPL37P10-201ENST00000412884 288 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 PMCHL1-202ENST00000423102 261 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC016696.1-201ENST00000446949 318 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC053481.1-201ENST00000467217 306 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SL177P-201ENST00000476596 299 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RPL7P43-201ENST00000478876 753 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SL214P-201ENST00000487317 265 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SL814P-201ENST00000487715 300 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 TRBVA-201ENST00000498804 316 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 SNRPCP2-201ENST00000504370 475 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC006499.3-201ENST00000506077 748 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SKP24-201ENST00000515888 284 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU6-566P-201ENST00000516790 107 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 uc_338.22-201ENST00000622722 187 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC104623.2-202ENST00000623477 4002 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL442128.2-201ENST00000620246 1824 ntBASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1Q5Y7H0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 BDP1P-201ENST00000582658 1990 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 C4BPAP1-201ENST00000415474 1893 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 RPL23P2-201ENST00000320371 421 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 RPL32P3-201ENST00000359025 275 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU6-574P-201ENST00000384265 107 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU6-463P-201ENST00000384340 107 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 Y_RNA.576-201ENST00000384781 102 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL359643.1-201ENST00000404109 423 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 MIR1182-201ENST00000408363 97 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU4-34P-201ENST00000410431 124 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC093106.2-201ENST00000428212 385 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 IPO7P1-201ENST00000442031 636 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms