Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC128687.1-201ENST00000605304 619 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC002064.3-201ENST00000623448 346 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 RNU1-138P-201ENST00000384093 164 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC026412.2-201ENST00000512270 1075 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AL160237.3-201ENST00000604114 1013 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC245517.5-201ENST00000611529 162 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC009487.2-201ENST00000420969 6821 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC093909.5-201ENST00000621839 1799 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 SAR1AP2-201ENST00000392696 594 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC013470.3-201ENST00000420252 1194 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 MTAPP1-201ENST00000489154 819 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC007536.1-201ENST00000533382 349 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC092650.2-201ENST00000619984 902 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AL160394.1-201ENST00000624765 724 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 MIR583-201ENST00000384846 75 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC005005.2-201ENST00000420779 380 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 ARF4P2-201ENST00000430209 526 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 HSPE1P18-201ENST00000517602 280 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 AC135628.1-201ENST00000568867 534 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 NF1P5-201ENST00000588287 448 ntBASIC1.45□□□□□ -2.18
VPS13DQ5THJ4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 MTND5P27-201ENST00000428871 1720 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 SNORD21-201ENST00000383953 95 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 SNORA51.11-201ENST00000384442 131 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 MTCO1P42-201ENST00000457379 726 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AL133271.1-201ENST00000538229 291 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 MIR4255-201ENST00000579351 72 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 TPMTP1-201ENST00000592307 737 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AC093591.3-201ENST00000634516 308 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 RWDD4P2-201ENST00000426392 563 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 RPL23AP62-201ENST00000463396 453 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 RWDD4P1-201ENST00000488019 565 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 RPS27P27-201ENST00000498779 255 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 TMEM248P1-201ENST00000510579 951 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AC080128.1-201ENST00000474389 1917 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AC093010.3-201ENST00000570269 15214 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 RNA5SP239-201ENST00000410218 129 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 MUPP-201ENST00000438111 566 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AL353705.4-201ENST00000449661 238 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AC108729.3-201ENST00000513484 108 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 RPS27AP18-201ENST00000515536 459 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 SCARNA16.3-201ENST00000516595 184 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AC025881.1-201ENST00000518851 512 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 ISCA1P3-201ENST00000577104 373 ntBASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
VPS13DQ5THJ4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AL358453.1-201ENST00000422522 250 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 MTATP6P11-201ENST00000428071 670 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AC129850.1-201ENST00000436203 508 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 TRAV31-201ENST00000502780 342 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AP000889.2-201ENST00000532684 490 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms