Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPL7P36-201ENST00000444633 681 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 TPT1P12-201ENST00000448968 492 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 MTND1P9-201ENST00000453775 944 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 RN7SL810P-201ENST00000493031 276 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC096751.1-202ENST00000502691 1067 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC38Q502W7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 RNU6-528P-201ENST00000516926 100 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC103783.1-201ENST00000520506 373 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC38Q502W7 MIR4697-201ENST00000582977 78 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC019193.2-201ENST00000610012 634 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 MIR6810-201ENST00000622701 70 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 AC091965.5-201ENST00000624785 342 ntBASIC4.28□□□□□ -1.72
CCDC38Q502W7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC38Q502W7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC38Q502W7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC38Q502W7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
CCDC38Q502W7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC38Q502W7 BDP1P-201ENST00000582658 1990 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 U3.20-201ENST00000390909 217 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 SKINT1L-201ENST00000401057 817 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 MIR1302-8-201ENST00000408342 128 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 RN7SKP235-201ENST00000410662 305 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 CCDC58P2-201ENST00000417131 366 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 OR8F1P-201ENST00000425243 930 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC092017.2-201ENST00000427600 362 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 RPS29P17-201ENST00000430795 166 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 AL121871.1-201ENST00000443413 436 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 MTND2P4-201ENST00000445034 1004 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC092754.2-201ENST00000463506 460 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 RPS29P19-201ENST00000479709 171 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 RPL7P23-201ENST00000493874 747 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 RNA5SP519-201ENST00000516480 119 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 RNA5SP73-201ENST00000516744 108 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 RNU6-1073P-201ENST00000517182 106 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 NDUFA5P2-201ENST00000519723 344 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC007599.1-201ENST00000568688 1174 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC015967.1-201ENST00000619893 476 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 AL353748.2-201ENST00000622148 471 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC073530.2-201ENST00000623987 261 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 AC079597.1-201ENST00000624306 508 ntBASIC4.27□□□□□ -1.73
CCDC38Q502W7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC38Q502W7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC38Q502W7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC38Q502W7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC38Q502W7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC38Q502W7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC38Q502W7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC38Q502W7 ELL2P3-201ENST00000457883 1602 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 RNU5F-6P-201ENST00000362979 116 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 SNORA26.8-201ENST00000391306 124 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 ELOCP19-201ENST00000411919 318 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 NPM1P11-201ENST00000417106 855 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC098826.1-201ENST00000433943 471 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC096638.2-201ENST00000434965 711 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 CBX1P1-201ENST00000440184 427 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 EPS15P1-201ENST00000448836 336 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC010655.1-201ENST00000449336 292 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AP1S2P1-201ENST00000457344 379 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 UBDP1-202ENST00000457888 382 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 AL024509.2-201ENST00000493462 493 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AL139099.1-201ENST00000497398 403 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 RNU2-58P-201ENST00000516403 183 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 RNA5SP49-201ENST00000516450 115 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms