Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 Z99129.2-201ENST00000619967 314 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 AC004808.1-201ENST00000627671 721 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 LRRC77P-213ENST00000637727 880 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 AC099654.8-201ENST00000637757 681 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFX4Q33E94 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFX4Q33E94 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFX4Q33E94 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFX4Q33E94 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.89□□□□□ -1.95
RFX4Q33E94 MAPK10-322ENST00000641485 4530 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFX4Q33E94 RNU6-251P-201ENST00000363235 104 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 RNU6-263P-201ENST00000363811 107 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
RFX4Q33E94 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFX4Q33E94 RNU6-1181P-201ENST00000384191 106 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 MIR200C-201ENST00000384980 68 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 MIR134-201ENST00000385258 73 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 SAR1AP2-201ENST00000392696 594 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 PTMAP2-201ENST00000397627 327 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AL133264.1-201ENST00000407157 562 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 BOLA3P4-201ENST00000418151 400 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 OFD1P18Y-201ENST00000420889 959 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 HSPE1P1-201ENST00000421494 318 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX4Q33E94 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AC091286.1-201ENST00000431233 461 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX4Q33E94 YWHAZP7-201ENST00000436906 631 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 RPL17P49-201ENST00000443728 411 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX4Q33E94 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 snoU13.24-201ENST00000458998 104 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 RPL21P8-201ENST00000465083 535 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 RPL23AP11-201ENST00000475260 469 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AC068724.1-201ENST00000487100 792 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX4Q33E94 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX4Q33E94 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX4Q33E94 DYNLL1P6-201ENST00000503440 264 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AC021678.1-201ENST00000505195 936 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX4Q33E94 OR4A45P-201ENST00000529954 901 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.89□□□□□ -1.95
RFX4Q33E94 HIGD1AP1-201ENST00000550979 275 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.89□□□□□ -1.95
RFX4Q33E94 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.89□□□□□ -1.95
RFX4Q33E94 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX4Q33E94 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX4Q33E94 AL022067.1-201ENST00000602426 454 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AC025588.3-201ENST00000604182 274 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AL445435.1-201ENST00000604232 665 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AL009028.1-201ENST00000604895 802 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 RNU6-1192P-201ENST00000612197 107 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AL592148.2-201ENST00000612210 372 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 RNU6-489P-201ENST00000618289 107 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 AC084824.4-201ENST00000620106 731 ntBASIC2.89□□□□□ -1.95
RFX4Q33E94 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX4Q33E94 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFX4Q33E94 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX4Q33E94 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RFX4Q33E94 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX4Q33E94 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFX4Q33E94 AC130650.2-201ENST00000618736 2403 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFX4Q33E94 RNA5SP50-201ENST00000363731 107 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFX4Q33E94 MIR887-201ENST00000401258 79 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 MTCO1P56-201ENST00000401674 224 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AL121978.1-201ENST00000402778 359 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AL079342.2-201ENST00000403367 482 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX4Q33E94 BX323014.1-201ENST00000412876 237 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX4Q33E94 HSFY4P-201ENST00000415994 1181 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX4Q33E94 AC092634.6-201ENST00000418558 192 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 KRR1P1-201ENST00000419430 803 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 RAC1P8-201ENST00000427086 527 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX4Q33E94 HMGN2P31-201ENST00000432430 273 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX4Q33E94 RNF2P1-201ENST00000442955 1010 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 MTCYBP42-201ENST00000444653 1130 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX4Q33E94 MTATP6P14-201ENST00000455189 673 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX4Q33E94 OR5H5P-201ENST00000503164 928 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AC084024.2-201ENST00000503480 791 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFX4Q33E94 RNA5SP468-201ENST00000516782 93 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.88□□□□□ -1.95
RFX4Q33E94 AC118942.1-201ENST00000529674 1035 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AC007536.1-201ENST00000533382 349 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX4Q33E94 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.88□□□□□ -1.95
RFX4Q33E94 AC034105.4-201ENST00000568304 277 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms