Protein–RNA interactions for Protein: Q15431

SYCP1, Synaptonemal complex protein 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1Q15431 SNORA9.2-201ENST00000365361 133 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 SNORD21-201ENST00000383953 95 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 FO393413.1-201ENST00000402892 195 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 HMGN2P35-201ENST00000412164 270 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 HMGN2P30-201ENST00000423237 256 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCP1Q15431 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCP1Q15431 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.16□□□□□ -1.9
SYCP1Q15431 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.16□□□□□ -1.9
SYCP1Q15431 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.16□□□□□ -1.9
SYCP1Q15431 AL031183.1-201ENST00000457667 207 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCP1Q15431 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCP1Q15431 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.16□□□□□ -1.9
SYCP1Q15431 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCP1Q15431 AL121603.1-201ENST00000553815 142 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.16□□□□□ -1.9
SYCP1Q15431 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCP1Q15431 NUTF2P8-201ENST00000604593 363 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 RPL23AP88-201ENST00000605759 454 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 AC009570.1-201ENST00000609599 745 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 AL355493.4-201ENST00000618530 292 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 AC007275.1-201ENST00000621243 671 ntBASIC3.16□□□□□ -1.9
SYCP1Q15431 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.16□□□□□ -1.9
SYCP1Q15431 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.16□□□□□ -1.9
SYCP1Q15431 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SYCP1Q15431 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SYCP1Q15431 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYCP1Q15431 AL365361.1-201ENST00000566942 3481 ntBASIC3.15□□□□□ -1.9
SYCP1Q15431 GSTA8P-201ENST00000404253 637 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.15□□□□□ -1.91
SYCP1Q15431 AL513321.1-201ENST00000441175 761 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.15□□□□□ -1.91
SYCP1Q15431 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.15□□□□□ -1.91
SYCP1Q15431 AC009901.1-201ENST00000506703 541 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.15□□□□□ -1.91
SYCP1Q15431 SNORA9.3-201ENST00000516383 129 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 AC009812.2-201ENST00000517657 457 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.15□□□□□ -1.91
SYCP1Q15431 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.15□□□□□ -1.91
SYCP1Q15431 NBEAP1-201ENST00000554452 979 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 AL391156.1-201ENST00000554965 554 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.15□□□□□ -1.91
SYCP1Q15431 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.15□□□□□ -1.91
SYCP1Q15431 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.15□□□□□ -1.91
SYCP1Q15431 AC245036.5-201ENST00000596330 847 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.15□□□□□ -1.91
SYCP1Q15431 AC008083.4-201ENST00000615076 444 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.15□□□□□ -1.91
SYCP1Q15431 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.15□□□□□ -1.91
SYCP1Q15431 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SYCP1Q15431 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SYCP1Q15431 ZNF833P-201ENST00000424938 1494 ntBASIC3.15□□□□□ -1.91
SYCP1Q15431 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SYCP1Q15431 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SYCP1Q15431 MIR6073-201ENST00000352083 89 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 RNA5SP258-201ENST00000362750 119 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 RNU1-109P-201ENST00000383960 147 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 MIR142-201ENST00000384835 87 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 MIR128-1-201ENST00000384921 82 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 SNORA48.2-201ENST00000390926 124 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SYCP1Q15431 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.14□□□□□ -1.91
SYCP1Q15431 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.14□□□□□ -1.91
SYCP1Q15431 AC073310.1-201ENST00000423226 1033 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 AC073508.1-201ENST00000428866 656 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 AC005189.1-201ENST00000431286 310 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 PTP4A1P3-201ENST00000433661 420 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.14□□□□□ -1.91
SYCP1Q15431 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
SYCP1Q15431 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.14□□□□□ -1.91
SYCP1Q15431 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.14□□□□□ -1.91
SYCP1Q15431 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.14□□□□□ -1.91
SYCP1Q15431 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.14□□□□□ -1.91
SYCP1Q15431 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.14□□□□□ -1.91
SYCP1Q15431 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.14□□□□□ -1.91
SYCP1Q15431 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.14□□□□□ -1.91
SYCP1Q15431 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SYCP1Q15431 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.14□□□□□ -1.91
SYCP1Q15431 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.14□□□□□ -1.91
SYCP1Q15431 AC020895.1-201ENST00000595362 272 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 AC022387.2-201ENST00000604050 448 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 AL160237.3-201ENST00000604114 1013 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 AL513477.2-201ENST00000607858 568 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 CYCSP41-201ENST00000616920 296 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 MIR6076-201ENST00000617521 113 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.14□□□□□ -1.91
SYCP1Q15431 LINC00216-201ENST00000623548 1126 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 AL121594.5-201ENST00000631724 573 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SYCP1Q15431 AC000403.1-201ENST00000613696 3585 ntBASIC3.14□□□□□ -1.91
SYCP1Q15431 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SYCP1Q15431 SGO1P2-201ENST00000429458 1589 ntBASIC3.13□□□□□ -1.91
SYCP1Q15431 AL161431.1-201ENST00000618966 4205 ntBASIC3.13□□□□□ -1.91
SYCP1Q15431 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SYCP1Q15431 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
SYCP1Q15431 RNA5SP252-201ENST00000391131 119 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms