Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCH1Q13635 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.77□□□□□ -1.81
PTCH1Q13635 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCH1Q13635 MIR1250-201ENST00000408098 113 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 AC069218.2-201ENST00000411665 344 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCH1Q13635 MTCO3P43-201ENST00000440974 771 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.77□□□□□ -1.81
PTCH1Q13635 OR52A4P-202ENST00000481634 799 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCH1Q13635 AC133963.2-201ENST00000513686 578 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 PDCL2P2-201ENST00000533651 189 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCH1Q13635 LINC00557-201ENST00000563184 1279 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 MIR4504-201ENST00000577413 92 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCH1Q13635 YWHAQP7-201ENST00000603536 658 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 AC025754.2-201ENST00000606491 432 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 FRG1HP-204ENST00000617940 757 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCH1Q13635 AC009039.2-201ENST00000624524 529 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 AC092608.3-201ENST00000625017 386 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCH1Q13635 MTND5P28-201ENST00000438005 1594 ntBASIC3.77□□□□□ -1.81
PTCH1Q13635 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCH1Q13635 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTCH1Q13635 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCH1Q13635 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
PTCH1Q13635 AC092593.1-201ENST00000515413 1815 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTCH1Q13635 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCH1Q13635 AL589826.1-201ENST00000340697 249 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 RNU1-35P-201ENST00000362782 153 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 Y_RNA.238-201ENST00000364441 102 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 RNU6-1005P-201ENST00000384519 107 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 MIR525-201ENST00000384978 85 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PTCH1Q13635 RNU6-272P-201ENST00000411028 104 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCH1Q13635 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.76□□□□□ -1.81
PTCH1Q13635 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCH1Q13635 RPL23AP31-201ENST00000456160 467 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 RPL9P32-201ENST00000464118 620 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
PTCH1Q13635 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.76□□□□□ -1.81
PTCH1Q13635 RNA5SP320-201ENST00000516263 124 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCH1Q13635 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.76□□□□□ -1.81
PTCH1Q13635 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCH1Q13635 AC243972.3-201ENST00000539655 198 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCH1Q13635 AL009028.1-201ENST00000604895 802 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 AL355493.4-201ENST00000618530 292 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 AL109659.3-201ENST00000624985 950 ntBASIC3.76□□□□□ -1.81
PTCH1Q13635 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTCH1Q13635 DSTNP4-201ENST00000399472 474 ntBASIC3.75□□□□□ -1.81
PTCH1Q13635 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.75□□□□□ -1.81
PTCH1Q13635 AL591806.2-201ENST00000433122 173 ntBASIC3.75□□□□□ -1.81
PTCH1Q13635 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.75□□□□□ -1.81
PTCH1Q13635 AC092451.1-201ENST00000480211 153 ntBASIC3.75□□□□□ -1.81
PTCH1Q13635 AC005921.1-201ENST00000510589 286 ntBASIC3.75□□□□□ -1.81
PTCH1Q13635 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.75□□□□□ -1.81
PTCH1Q13635 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.75□□□□□ -1.81
PTCH1Q13635 UBTFL10-201ENST00000528532 562 ntBASIC3.75□□□□□ -1.81
PTCH1Q13635 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.75□□□□□ -1.81
PTCH1Q13635 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.75□□□□□ -1.81
PTCH1Q13635 AC010928.3-201ENST00000587712 541 ntBASIC3.75□□□□□ -1.81
PTCH1Q13635 U73479.1-201ENST00000618062 168 ntBASIC3.75□□□□□ -1.81
PTCH1Q13635 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.75□□□□□ -1.81
PTCH1Q13635 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTCH1Q13635 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.75□□□□□ -1.81
PTCH1Q13635 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCH1Q13635 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCH1Q13635 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCH1Q13635 MTND4P8-201ENST00000514997 1362 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCH1Q13635 RNA5SP289-201ENST00000362332 137 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 RNA5SP189-201ENST00000364920 115 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 ATP5F1P6-201ENST00000402768 767 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 RN7SKP223-201ENST00000410582 62 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.74□□□□□ -1.81
PTCH1Q13635 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.74□□□□□ -1.81
PTCH1Q13635 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCH1Q13635 FABP5P3-201ENST00000437960 408 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.74□□□□□ -1.81
PTCH1Q13635 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCH1Q13635 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCH1Q13635 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCH1Q13635 AC010468.3-201ENST00000508225 458 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCH1Q13635 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCH1Q13635 SNORA76.2-201ENST00000517095 137 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCH1Q13635 OSBPL9P3-201ENST00000534523 595 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCH1Q13635 TRAV37-201ENST00000553906 342 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 AC012254.4-201ENST00000588843 273 ntBASIC3.74□□□□□ -1.81
PTCH1Q13635 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms