Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.63□□□□□ -1.83
GABPAQ06546 MTCO3P1-205ENST00000422088 832 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC005517.2-201ENST00000424673 553 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 RPL31P54-201ENST00000429803 370 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
GABPAQ06546 AC107083.1-201ENST00000439643 279 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC079776.3-201ENST00000450665 370 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 RPL9P32-201ENST00000464118 620 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.63□□□□□ -1.83
GABPAQ06546 NIPA2P2-201ENST00000496376 1083 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 NDUFB4P9-201ENST00000511646 388 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.63□□□□□ -1.83
GABPAQ06546 AC119751.5-201ENST00000514077 770 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.63□□□□□ -1.83
GABPAQ06546 ARL2BPP5-201ENST00000523141 481 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.63□□□□□ -1.83
GABPAQ06546 OR4A45P-201ENST00000529954 901 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.63□□□□□ -1.83
GABPAQ06546 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.63□□□□□ -1.83
GABPAQ06546 AC011458.1-201ENST00000604034 617 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AL365503.1-201ENST00000605247 905 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC092954.1-201ENST00000609121 445 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC016597.2-201ENST00000613256 341 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC010975.3-201ENST00000618727 978 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.63□□□□□ -1.83
GABPAQ06546 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.63□□□□□ -1.83
GABPAQ06546 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.63□□□□□ -1.83
GABPAQ06546 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GABPAQ06546 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GABPAQ06546 RNU6-251P-201ENST00000363235 104 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 RNU4-51P-201ENST00000364206 140 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 SNORA71.1-201ENST00000364523 117 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GABPAQ06546 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.62□□□□□ -1.83
GABPAQ06546 AL023807.1-201ENST00000407932 359 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 RPL31P2-201ENST00000413849 377 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 AL139132.1-201ENST00000431587 344 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 AC241584.1-201ENST00000438469 1241 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 AC140076.1-201ENST00000449897 361 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
GABPAQ06546 HMGN1P18-201ENST00000457642 277 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
GABPAQ06546 BOLA3P3-201ENST00000505182 232 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GABPAQ06546 AC113420.1-201ENST00000507903 571 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 SNORA48.10-201ENST00000516965 160 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 AC009812.2-201ENST00000517657 457 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 OR10V3P-201ENST00000525712 725 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 AC022080.3-201ENST00000544433 482 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.62□□□□□ -1.83
GABPAQ06546 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.62□□□□□ -1.83
GABPAQ06546 MTND3P13-201ENST00000574391 343 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 LARP7P3-201ENST00000579888 337 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.62□□□□□ -1.83
GABPAQ06546 AC025588.3-201ENST00000604182 274 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 RNA5SP108-201ENST00000605921 117 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.62□□□□□ -1.83
GABPAQ06546 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.62□□□□□ -1.83
GABPAQ06546 AL157392.4-201ENST00000609756 345 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 CYCSP41-201ENST00000616920 296 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.62□□□□□ -1.83
GABPAQ06546 MTND5P3-201ENST00000438536 1800 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 MTCO1P24-201ENST00000515438 1558 ntBASIC3.62□□□□□ -1.83
GABPAQ06546 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GABPAQ06546 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.62□□□□□ -1.83
GABPAQ06546 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.62□□□□□ -1.83
GABPAQ06546 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GABPAQ06546 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
GABPAQ06546 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GABPAQ06546 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.61□□□□□ -1.83
GABPAQ06546 PWAR6-201ENST00000552334 4618 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AL359893.1-201ENST00000447628 1580 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
GABPAQ06546 MIR22-201ENST00000362190 85 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 RNU6-374P-201ENST00000364146 108 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.61□□□□□ -1.83
GABPAQ06546 MIR184-201ENST00000384962 84 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 MT-TC-201ENST00000387405 66 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 SNORD65.1-201ENST00000390889 71 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 RPL7P25-201ENST00000404151 721 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.61□□□□□ -1.83
GABPAQ06546 MTCO2P23-201ENST00000425216 680 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.61□□□□□ -1.83
GABPAQ06546 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.61□□□□□ -1.83
GABPAQ06546 USP9YP7-201ENST00000436723 430 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
GABPAQ06546 AC112492.1-201ENST00000449607 712 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.61□□□□□ -1.83
GABPAQ06546 USP9YP32-201ENST00000452432 430 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.61□□□□□ -1.83
GABPAQ06546 MTCO3P2-201ENST00000457365 171 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AC117440.1-201ENST00000474107 571 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 RPS29P26-201ENST00000477483 171 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.61□□□□□ -1.83
GABPAQ06546 AC096576.1-201ENST00000489014 359 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 RPL21P131-201ENST00000497298 483 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.61□□□□□ -1.83
GABPAQ06546 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms