Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.37□□□□□ -2.19
HSPG2P98160 AC126177.3-201ENST00000551839 688 ntBASIC1.37□□□□□ -2.19
HSPG2P98160 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.37□□□□□ -2.19
HSPG2P98160 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.37□□□□□ -2.19
HSPG2P98160 AL021368.2-201ENST00000606125 5352 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
HSPG2P98160 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.36□□□□□ -2.19
HSPG2P98160 NDUFB4P6-201ENST00000436819 366 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AC245517.2-201ENST00000442890 346 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.36□□□□□ -2.19
HSPG2P98160 MIR3186-201ENST00000577404 85 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.36□□□□□ -2.19
HSPG2P98160 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.36□□□□□ -2.19
HSPG2P98160 AC022336.2-201ENST00000568966 2538 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
HSPG2P98160 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.36□□□□□ -2.19
HSPG2P98160 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HSPG2P98160 AL590399.6-201ENST00000446396 307 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 RNA5SP182-201ENST00000516064 82 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.36□□□□□ -2.19
HSPG2P98160 HMGB3P26-201ENST00000560051 582 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AC080100.1-201ENST00000624239 5356 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
HSPG2P98160 Y_RNA.178-201ENST00000363832 102 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 EIF5P1-201ENST00000400019 1231 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AC104389.3-201ENST00000445629 235 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AL118520.1-201ENST00000450770 291 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.36□□□□□ -2.19
HSPG2P98160 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.36□□□□□ -2.19
HSPG2P98160 ARL2BPP2-201ENST00000550907 489 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.36□□□□□ -2.19
HSPG2P98160 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.36□□□□□ -2.19
HSPG2P98160 AP005901.5-201ENST00000545779 1796 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HSPG2P98160 RNU1-75P-201ENST00000347264 129 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AC098826.1-201ENST00000433943 471 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.36□□□□□ -2.19
HSPG2P98160 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HSPG2P98160 XKRY-201ENST00000510392 1100 ntBASIC1.36□□□□□ -2.19
HSPG2P98160 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HSPG2P98160 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.35□□□□□ -2.19
HSPG2P98160 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HSPG2P98160 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HSPG2P98160 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HSPG2P98160 AC010680.1-201ENST00000590024 3590 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 MTND5P23-201ENST00000430812 1655 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HSPG2P98160 AC012498.1-201ENST00000424037 437 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 MTCO2P17-201ENST00000424336 677 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AC013410.1-201ENST00000436223 1232 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.35□□□□□ -2.19
HSPG2P98160 SNORD13-201ENST00000459299 104 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.35□□□□□ -2.19
HSPG2P98160 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.35□□□□□ -2.19
HSPG2P98160 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.35□□□□□ -2.19
HSPG2P98160 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.35□□□□□ -2.19
HSPG2P98160 AL359198.2-201ENST00000611836 194 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AC107871.2-201ENST00000612894 502 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 PHKBP1-201ENST00000450951 1951 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HSPG2P98160 SNORA25.6-201ENST00000364121 118 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HSPG2P98160 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.35□□□□□ -2.19
HSPG2P98160 GAPDHP27-201ENST00000447427 1020 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 RPS27P29-201ENST00000463110 252 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AC092991.1-201ENST00000477176 376 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AC068305.1-201ENST00000497406 726 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.35□□□□□ -2.19
HSPG2P98160 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.35□□□□□ -2.19
HSPG2P98160 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AC087468.1-201ENST00000604365 630 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HSPG2P98160 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HSPG2P98160 SNORA41-201ENST00000384675 132 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 RNU2-68P-201ENST00000410878 191 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AL158825.1-201ENST00000414735 521 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 RPL36AP33-201ENST00000450395 310 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AC104090.1-201ENST00000506341 1171 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HSPG2P98160 RN7SKP43-201ENST00000516173 320 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 SCARNA16.3-201ENST00000516595 184 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AC025260.1-201ENST00000548858 430 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 CYP3A51P-201ENST00000633513 256 ntBASIC1.35□□□□□ -2.19
HSPG2P98160 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.35□□□□□ -2.19
HSPG2P98160 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HSPG2P98160 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
HSPG2P98160 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HSPG2P98160 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HSPG2P98160 AC009487.2-201ENST00000420969 6821 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.34□□□□□ -2.19
HSPG2P98160 RNU6-707P-201ENST00000364647 95 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 RNU6-356P-201ENST00000384140 107 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HSPG2P98160 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 AL390023.1-201ENST00000428836 262 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 EXTL2P1-201ENST00000446218 416 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 RPS26P24-201ENST00000497656 331 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms