Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX6-1P78426 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 OR5J1P-201ENST00000313544 939 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 RNA5SP191-201ENST00000362585 102 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 RN7SKP227-201ENST00000364445 330 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 U3.11-201ENST00000364476 212 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 RNU6-169P-201ENST00000365336 107 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 RNU6-1279P-201ENST00000383917 103 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 Y_RNA.481-201ENST00000384373 102 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 SNORA70.10-201ENST00000384515 134 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 SNORD115-47-201ENST00000391226 86 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 RN7SKP16-201ENST00000410180 299 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX6-1P78426 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX6-1P78426 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX6-1P78426 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX6-1P78426 GPR143P-201ENST00000434155 205 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AC093414.1-201ENST00000434712 514 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX6-1P78426 AC079781.2-201ENST00000446424 169 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 RPL23AP20-201ENST00000447965 421 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX6-1P78426 RPL36AP13-201ENST00000457490 317 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AC022364.2-201ENST00000457963 554 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX6-1P78426 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX6-1P78426 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
NKX6-1P78426 AC068305.1-201ENST00000497406 726 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 AC019235.1-201ENST00000503847 207 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AC111000.3-201ENST00000508057 576 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AC105914.1-201ENST00000511798 226 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 RNU2-10P-201ENST00000516375 211 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX6-1P78426 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX6-1P78426 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX6-1P78426 OR5AQ1P-201ENST00000527596 927 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX6-1P78426 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX6-1P78426 RPL21P12-201ENST00000559810 515 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 HMGB1P33-201ENST00000563485 527 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX6-1P78426 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX6-1P78426 AC007363.1-201ENST00000604736 620 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AC008966.2-201ENST00000606157 453 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 AC017083.3-201ENST00000609955 700 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX6-1P78426 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 DDX10P1-201ENST00000448545 1933 ntBASIC4.28□□□□□ -1.72
NKX6-1P78426 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX6-1P78426 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX6-1P78426 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX6-1P78426 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX6-1P78426 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX6-1P78426 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NKX6-1P78426 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
NKX6-1P78426 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
NKX6-1P78426 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.27□□□□□ -1.73
NKX6-1P78426 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.27□□□□□ -1.73
NKX6-1P78426 RNU6-108P-201ENST00000365558 107 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
NKX6-1P78426 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
NKX6-1P78426 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.27□□□□□ -1.73
NKX6-1P78426 Y_RNA.402-201ENST00000383972 102 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 Y_RNA.450-201ENST00000384198 113 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 AL109755.1-201ENST00000401791 649 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 UQCRBP1-201ENST00000421129 336 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC244098.2-201ENST00000422068 99 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 TDGF1P1-201ENST00000445734 527 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 AL691482.1-201ENST00000453255 87 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 NANOGP10-201ENST00000453325 895 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 MTND2P24-201ENST00000453434 806 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC005008.1-201ENST00000456151 612 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.27□□□□□ -1.73
NKX6-1P78426 RPL38P1-201ENST00000460914 211 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms