Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.21□□□□□ -2.06
UBA52P62987 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.21□□□□□ -2.06
UBA52P62987 MIR6817-201ENST00000615588 66 ntBASIC2.21□□□□□ -2.06
UBA52P62987 AL590808.1-201ENST00000618696 141 ntBASIC2.21□□□□□ -2.06
UBA52P62987 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
UBA52P62987 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
UBA52P62987 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
UBA52P62987 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
UBA52P62987 RNA5SP68-201ENST00000363885 119 ntBASIC2.2□□□□□ -2.06
UBA52P62987 CD24P4-201ENST00000382840 243 ntBASIC2.2□□□□□ -2.06
UBA52P62987 SNORA70B-201ENST00000384210 135 ntBASIC2.2□□□□□ -2.06
UBA52P62987 ANAPC10P1-201ENST00000395991 556 ntBASIC2.2□□□□□ -2.06
UBA52P62987 AL356057.2-201ENST00000403318 432 ntBASIC2.2□□□□□ -2.06
UBA52P62987 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.2□□□□□ -2.06
UBA52P62987 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.2□□□□□ -2.06
UBA52P62987 RPL23AP15-201ENST00000450202 459 ntBASIC2.2□□□□□ -2.06
UBA52P62987 HSPE1P6-201ENST00000479457 291 ntBASIC2.2□□□□□ -2.06
UBA52P62987 RPL37P25-201ENST00000507308 276 ntBASIC2.2□□□□□ -2.06
UBA52P62987 AC096725.1-201ENST00000514266 313 ntBASIC2.2□□□□□ -2.06
UBA52P62987 AP001646.1-201ENST00000527936 915 ntBASIC2.2□□□□□ -2.06
UBA52P62987 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.2□□□□□ -2.06
UBA52P62987 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
UBA52P62987 OR8L1P-201ENST00000534005 955 ntBASIC2.2□□□□□ -2.06
UBA52P62987 AC087241.2-201ENST00000535801 324 ntBASIC2.2□□□□□ -2.06
UBA52P62987 AC068831.7-201ENST00000616954 363 ntBASIC2.2□□□□□ -2.06
UBA52P62987 AP004607.9-201ENST00000618202 316 ntBASIC2.2□□□□□ -2.06
UBA52P62987 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.2□□□□□ -2.06
UBA52P62987 AC090897.3-201ENST00000636973 1157 ntBASIC2.2□□□□□ -2.06
UBA52P62987 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
UBA52P62987 AC109315.1-201ENST00000584143 1347 ntBASIC2.19□□□□□ -2.06
UBA52P62987 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.19□□□□□ -2.06
UBA52P62987 AC012321.1-201ENST00000561622 1588 ntBASIC2.19□□□□□ -2.06
UBA52P62987 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
UBA52P62987 AC007336.1-201ENST00000576365 3828 ntBASIC2.19□□□□□ -2.06
UBA52P62987 SNORA14A-201ENST00000364773 135 ntBASIC2.19□□□□□ -2.06
UBA52P62987 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.19□□□□□ -2.06
UBA52P62987 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.19□□□□□ -2.06
UBA52P62987 NPM1P11-201ENST00000417106 855 ntBASIC2.19□□□□□ -2.06
UBA52P62987 USP9YP27-201ENST00000418455 438 ntBASIC2.19□□□□□ -2.06
UBA52P62987 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
UBA52P62987 RPS3P1-201ENST00000456781 192 ntBASIC2.19□□□□□ -2.06
UBA52P62987 AC128713.1-201ENST00000471495 306 ntBASIC2.19□□□□□ -2.06
UBA52P62987 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.19□□□□□ -2.06
UBA52P62987 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.19□□□□□ -2.06
UBA52P62987 MTCO2P32-201ENST00000514865 403 ntBASIC2.19□□□□□ -2.06
UBA52P62987 RNU1-61P-201ENST00000516107 151 ntBASIC2.19□□□□□ -2.06
UBA52P62987 OR5BN1P-201ENST00000532955 829 ntBASIC2.19□□□□□ -2.06
UBA52P62987 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
UBA52P62987 AL645944.1-201ENST00000603857 493 ntBASIC2.19□□□□□ -2.06
UBA52P62987 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
UBA52P62987 CYP3A51P-201ENST00000633513 256 ntBASIC2.19□□□□□ -2.06
UBA52P62987 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.19□□□□□ -2.06
UBA52P62987 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
UBA52P62987 AC138915.1-201ENST00000565427 1685 ntBASIC2.18□□□□□ -2.06
UBA52P62987 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBA52P62987 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBA52P62987 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBA52P62987 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBA52P62987 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBA52P62987 RNU6-1331P-201ENST00000363658 106 ntBASIC2.18□□□□□ -2.06
UBA52P62987 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
UBA52P62987 XGY1-201ENST00000381172 446 ntBASIC2.18□□□□□ -2.06
UBA52P62987 AL139039.1-201ENST00000401900 692 ntBASIC2.18□□□□□ -2.06
UBA52P62987 U3.37-201ENST00000408528 213 ntBASIC2.18□□□□□ -2.06
UBA52P62987 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.18□□□□□ -2.06
UBA52P62987 RPLP0P7-201ENST00000416050 667 ntBASIC2.18□□□□□ -2.06
UBA52P62987 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
UBA52P62987 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.18□□□□□ -2.06
UBA52P62987 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.18□□□□□ -2.06
UBA52P62987 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.18□□□□□ -2.06
UBA52P62987 RPS15AP7-201ENST00000439294 405 ntBASIC2.18□□□□□ -2.06
UBA52P62987 RPL34P26-201ENST00000445636 354 ntBASIC2.18□□□□□ -2.06
UBA52P62987 CACYBPP2-201ENST00000453625 678 ntBASIC2.18□□□□□ -2.06
UBA52P62987 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.18□□□□□ -2.06
UBA52P62987 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.18□□□□□ -2.06
UBA52P62987 AC104687.1-201ENST00000485829 412 ntBASIC2.18□□□□□ -2.06
UBA52P62987 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.18□□□□□ -2.06
UBA52P62987 AC010625.1-201ENST00000511296 403 ntBASIC2.18□□□□□ -2.06
UBA52P62987 RNA5SP148-201ENST00000516527 94 ntBASIC2.18□□□□□ -2.06
UBA52P62987 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.18□□□□□ -2.06
UBA52P62987 AP002812.4-201ENST00000532139 286 ntBASIC2.18□□□□□ -2.06
UBA52P62987 AL512310.1-201ENST00000548639 172 ntBASIC2.18□□□□□ -2.06
UBA52P62987 AC007954.1-201ENST00000554198 494 ntBASIC2.18□□□□□ -2.06
UBA52P62987 CENPUP2-201ENST00000555897 1186 ntBASIC2.18□□□□□ -2.06
UBA52P62987 AC090616.5-202ENST00000582111 297 ntBASIC2.18□□□□□ -2.06
UBA52P62987 AP001029.3-201ENST00000588063 596 ntBASIC2.18□□□□□ -2.06
UBA52P62987 SNRPGP15-201ENST00000600149 222 ntBASIC2.18□□□□□ -2.06
UBA52P62987 AP003122.6-201ENST00000623831 495 ntBASIC2.18□□□□□ -2.06
UBA52P62987 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
UBA52P62987 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBA52P62987 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.17□□□□□ -2.06
UBA52P62987 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.17□□□□□ -2.06
UBA52P62987 AC233728.2-201ENST00000425348 757 ntBASIC2.17□□□□□ -2.06
UBA52P62987 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.17□□□□□ -2.06
UBA52P62987 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
UBA52P62987 LSM1P1-201ENST00000438629 273 ntBASIC2.17□□□□□ -2.06
UBA52P62987 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.17□□□□□ -2.06
UBA52P62987 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.17□□□□□ -2.06
UBA52P62987 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.17□□□□□ -2.06
UBA52P62987 MTCO3P35-201ENST00000485582 781 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms