Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CKS1BP61024 AC009812.4-201ENST00000569134 1805 ntBASIC2□□□□□ -2.09
CKS1BP61024 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2□□□□□ -2.09
CKS1BP61024 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
CKS1BP61024 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CKS1BP61024 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.99□□□□□ -2.09
CKS1BP61024 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CKS1BP61024 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 MIR1193-201ENST00000408109 78 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 AC245052.5-201ENST00000416320 649 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.99□□□□□ -2.09
CKS1BP61024 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.99□□□□□ -2.09
CKS1BP61024 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC1.99□□□□□ -2.09
CKS1BP61024 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.99□□□□□ -2.09
CKS1BP61024 AC022018.1-201ENST00000430685 241 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.99□□□□□ -2.09
CKS1BP61024 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.99□□□□□ -2.09
CKS1BP61024 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CKS1BP61024 RPS29P6-201ENST00000438196 145 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 AC104389.3-201ENST00000445629 235 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 AL627224.1-201ENST00000448334 444 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 PDSS1P2-201ENST00000449397 678 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 AC103987.1-201ENST00000473394 348 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.99□□□□□ -2.09
CKS1BP61024 AL133372.1-201ENST00000493565 745 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.99□□□□□ -2.09
CKS1BP61024 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC1.99□□□□□ -2.09
CKS1BP61024 AC068339.2-201ENST00000534395 618 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 ZNF415P1-201ENST00000582279 1166 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.99□□□□□ -2.09
CKS1BP61024 CYP3A51P-201ENST00000633513 256 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.99□□□□□ -2.09
CKS1BP61024 AC022336.2-201ENST00000568966 2538 ntBASIC1.99□□□□□ -2.09
CKS1BP61024 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
CKS1BP61024 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CKS1BP61024 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CKS1BP61024 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CKS1BP61024 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CKS1BP61024 AC004944.1-201ENST00000517807 3059 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CKS1BP61024 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.98□□□□□ -2.09
CKS1BP61024 RNU1-33P-201ENST00000364249 162 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 SNORA62.3-201ENST00000365110 153 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CKS1BP61024 RNU6-339P-201ENST00000384310 107 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CKS1BP61024 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.98□□□□□ -2.09
CKS1BP61024 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC1.98□□□□□ -2.09
CKS1BP61024 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.98□□□□□ -2.09
CKS1BP61024 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.98□□□□□ -2.09
CKS1BP61024 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.98□□□□□ -2.09
CKS1BP61024 COX6CP12-201ENST00000446748 202 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 ST13P20-201ENST00000447996 1065 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 C1DP3-201ENST00000455013 423 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 snoU13.22-201ENST00000459428 104 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 RN7SL293P-201ENST00000481765 281 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 AC090543.1-201ENST00000492168 485 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 AC021087.2-201ENST00000504656 1203 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.98□□□□□ -2.09
CKS1BP61024 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CKS1BP61024 AC107222.1-201ENST00000510899 637 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.98□□□□□ -2.09
CKS1BP61024 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.98□□□□□ -2.09
CKS1BP61024 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC1.98□□□□□ -2.09
CKS1BP61024 AC023632.4-201ENST00000517783 191 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 HMGB1P46-201ENST00000520062 610 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.98□□□□□ -2.09
CKS1BP61024 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.98□□□□□ -2.09
CKS1BP61024 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC1.98□□□□□ -2.09
CKS1BP61024 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CKS1BP61024 AC005242.1-201ENST00000585658 438 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.98□□□□□ -2.09
CKS1BP61024 BX323046.1-201ENST00000610145 535 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 HMGB1P24-202ENST00000615653 685 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.98□□□□□ -2.09
CKS1BP61024 AC020763.5-201ENST00000623298 430 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 AC018692.3-201ENST00000623929 123 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.98□□□□□ -2.09
CKS1BP61024 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.98□□□□□ -2.09
CKS1BP61024 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CKS1BP61024 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CKS1BP61024 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.98□□□□□ -2.09
CKS1BP61024 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CKS1BP61024 AC123912.3-201ENST00000600907 1367 ntBASIC1.98□□□□□ -2.09
CKS1BP61024 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CKS1BP61024 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.97□□□□□ -2.09
CKS1BP61024 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.97□□□□□ -2.09
CKS1BP61024 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CKS1BP61024 SNORA9.2-201ENST00000365361 133 ntBASIC1.97□□□□□ -2.09
CKS1BP61024 RNU6-98P-201ENST00000384173 107 ntBASIC1.97□□□□□ -2.09
CKS1BP61024 SNORA7.4-201ENST00000384249 137 ntBASIC1.97□□□□□ -2.09
CKS1BP61024 MIR512-1-201ENST00000384913 84 ntBASIC1.97□□□□□ -2.09
CKS1BP61024 MIR493-201ENST00000385254 89 ntBASIC1.97□□□□□ -2.09
CKS1BP61024 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CKS1BP61024 U3.29-201ENST00000391296 212 ntBASIC1.97□□□□□ -2.09
CKS1BP61024 PTMAP2-201ENST00000397627 327 ntBASIC1.97□□□□□ -2.09
CKS1BP61024 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.97□□□□□ -2.09
CKS1BP61024 AL512633.1-201ENST00000399931 655 ntBASIC1.97□□□□□ -2.09
CKS1BP61024 AL355497.1-201ENST00000406262 551 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms