Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.96□□□□□ -2.1
FOXA3P55318 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
FOXA3P55318 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
FOXA3P55318 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
FOXA3P55318 TAB3P1-202ENST00000452645 1634 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
FOXA3P55318 FRG1BP-201ENST00000278882 761 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 RNU6-263P-201ENST00000363811 107 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXA3P55318 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
FOXA3P55318 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
FOXA3P55318 MT-TC-201ENST00000387405 66 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 TAS2R15P-201ENST00000390674 928 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXA3P55318 Z82209.1-201ENST00000422141 2135 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 AC073508.1-201ENST00000428866 656 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXA3P55318 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXA3P55318 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXA3P55318 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXA3P55318 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXA3P55318 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.95□□□□□ -2.1
FOXA3P55318 AC011816.1-201ENST00000441346 546 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 Z99127.2-201ENST00000441426 334 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 OR51B8P-201ENST00000449892 769 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.95□□□□□ -2.1
FOXA3P55318 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXA3P55318 AC090543.1-201ENST00000492168 485 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 RNF138P1-201ENST00000502765 546 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXA3P55318 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXA3P55318 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.95□□□□□ -2.1
FOXA3P55318 IGKV2D-36-201ENST00000518643 226 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXA3P55318 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.95□□□□□ -2.1
FOXA3P55318 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.95□□□□□ -2.1
FOXA3P55318 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXA3P55318 NOP56P3-201ENST00000549457 385 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 CR383656.14-201ENST00000551951 406 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.95□□□□□ -2.1
FOXA3P55318 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXA3P55318 ACTR3BP3-201ENST00000565577 979 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXA3P55318 AC024153.1-201ENST00000603103 365 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 RPL23AP92-201ENST00000603609 255 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 NF1P10-201ENST00000613227 742 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 AC034102.8-201ENST00000615146 484 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.95□□□□□ -2.1
FOXA3P55318 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXA3P55318 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.95□□□□□ -2.1
FOXA3P55318 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
FOXA3P55318 PABPC1P9-201ENST00000426076 1612 ntBASIC1.95□□□□□ -2.1
FOXA3P55318 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
FOXA3P55318 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
FOXA3P55318 AC080100.1-201ENST00000624239 5356 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
FOXA3P55318 AL359693.1-201ENST00000614959 2407 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
FOXA3P55318 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
FOXA3P55318 RNU6-386P-201ENST00000362650 107 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
FOXA3P55318 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
FOXA3P55318 Y_RNA.493-201ENST00000384422 102 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AC073264.1-201ENST00000411508 416 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AL592148.1-201ENST00000413568 445 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.94□□□□□ -2.1
FOXA3P55318 AC069157.1-201ENST00000421749 137 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.94□□□□□ -2.1
FOXA3P55318 AC112492.1-201ENST00000449607 712 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 RBM43P1-201ENST00000476891 1081 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AC135721.1-201ENST00000497954 479 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.94□□□□□ -2.1
FOXA3P55318 AC108157.1-201ENST00000510511 539 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
FOXA3P55318 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.94□□□□□ -2.1
FOXA3P55318 RNA5SP282-201ENST00000516355 108 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 SNORA31.11-201ENST00000516528 139 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.94□□□□□ -2.1
FOXA3P55318 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.94□□□□□ -2.1
FOXA3P55318 AC087808.1-201ENST00000520501 361 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 CKS1BP7-201ENST00000522230 235 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.94□□□□□ -2.1
FOXA3P55318 AL121603.1-201ENST00000553815 142 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 H3F3AP1-201ENST00000559984 334 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AC087481.2-201ENST00000565492 330 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 MYL12BP1-201ENST00000569826 507 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC1.94□□□□□ -2.1
FOXA3P55318 AC124312.4-201ENST00000605533 310 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AL355810.1-201ENST00000614629 552 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC1.94□□□□□ -2.1
FOXA3P55318 CYP3A51P-201ENST00000633513 256 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 U6.105-201ENST00000637379 88 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
FOXA3P55318 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.94□□□□□ -2.1
FOXA3P55318 AC000403.1-201ENST00000613696 3585 ntBASIC1.94□□□□□ -2.1
FOXA3P55318 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
FOXA3P55318 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
FOXA3P55318 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.93□□□□□ -2.1
FOXA3P55318 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms