Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH13P55290 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH13P55290 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDH13P55290 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CDH13P55290 OTUD4P1-201ENST00000237841 3067 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AL645937.1-201ENST00000641739 1652 ntBASIC3.63□□□□□ -1.83
CDH13P55290 RPL21P132-201ENST00000331267 462 ntBASIC3.63□□□□□ -1.83
CDH13P55290 SNORD6-201ENST00000365444 73 ntBASIC3.63□□□□□ -1.83
CDH13P55290 RNU1-13P-201ENST00000384499 162 ntBASIC3.63□□□□□ -1.83
CDH13P55290 RNU6-253P-201ENST00000384730 105 ntBASIC3.63□□□□□ -1.83
CDH13P55290 RNA5SP424-201ENST00000390988 115 ntBASIC3.63□□□□□ -1.83
CDH13P55290 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH13P55290 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH13P55290 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH13P55290 OR8F1P-201ENST00000425243 930 ntBASIC3.63□□□□□ -1.83
CDH13P55290 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH13P55290 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH13P55290 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH13P55290 OR4C10P-201ENST00000434991 931 ntBASIC3.63□□□□□ -1.83
CDH13P55290 MTCYBP45-201ENST00000435243 565 ntBASIC3.63□□□□□ -1.83
CDH13P55290 MTND5P2-201ENST00000442927 1142 ntBASIC3.63□□□□□ -1.83
CDH13P55290 AC114755.5-201ENST00000447760 831 ntBASIC3.63□□□□□ -1.83
CDH13P55290 MTND1P31-201ENST00000449206 961 ntBASIC3.63□□□□□ -1.83
CDH13P55290 AC006480.1-201ENST00000449887 378 ntBASIC3.63□□□□□ -1.83
CDH13P55290 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.63□□□□□ -1.83
CDH13P55290 ANP32BP2-201ENST00000454525 545 ntBASIC3.63□□□□□ -1.83
CDH13P55290 ATG12P2-201ENST00000456830 416 ntBASIC3.63□□□□□ -1.83
CDH13P55290 snoU13.8-201ENST00000458890 104 ntBASIC3.63□□□□□ -1.83
CDH13P55290 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH13P55290 HSPE1P23-201ENST00000509838 286 ntBASIC3.63□□□□□ -1.83
CDH13P55290 MTND1P22-201ENST00000510572 951 ntBASIC3.63□□□□□ -1.83
CDH13P55290 RNU2-58P-201ENST00000516403 183 ntBASIC3.63□□□□□ -1.83
CDH13P55290 AC008489.1-201ENST00000524271 483 ntBASIC3.63□□□□□ -1.83
CDH13P55290 OR5AP1P-201ENST00000529730 940 ntBASIC3.63□□□□□ -1.83
CDH13P55290 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH13P55290 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH13P55290 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.63□□□□□ -1.83
CDH13P55290 AC145350.1-201ENST00000567426 208 ntBASIC3.63□□□□□ -1.83
CDH13P55290 VN1R90P-201ENST00000595717 726 ntBASIC3.63□□□□□ -1.83
CDH13P55290 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH13P55290 AP000811.1-201ENST00000603803 651 ntBASIC3.63□□□□□ -1.83
CDH13P55290 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH13P55290 AC018638.7-201ENST00000605836 1114 ntBASIC3.63□□□□□ -1.83
CDH13P55290 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH13P55290 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH13P55290 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH13P55290 AL391261.4-201ENST00000616012 481 ntBASIC3.63□□□□□ -1.83
CDH13P55290 FP236240.3-201ENST00000623061 327 ntBASIC3.63□□□□□ -1.83
CDH13P55290 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH13P55290 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH13P55290 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH13P55290 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH13P55290 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH13P55290 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH13P55290 PRO1804-201ENST00000623780 2050 ntBASIC3.63□□□□□ -1.83
CDH13P55290 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
CDH13P55290 AC093908.1-201ENST00000623125 8092 ntBASIC3.62□□□□□ -1.83
CDH13P55290 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH13P55290 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 Y_RNA.18-201ENST00000362461 102 ntBASIC3.62□□□□□ -1.83
CDH13P55290 RNU6-1155P-201ENST00000363554 107 ntBASIC3.62□□□□□ -1.83
CDH13P55290 RNU6-283P-201ENST00000364788 107 ntBASIC3.62□□□□□ -1.83
CDH13P55290 RNU6-359P-201ENST00000365466 108 ntBASIC3.62□□□□□ -1.83
CDH13P55290 RNA5SP88-201ENST00000365560 109 ntBASIC3.62□□□□□ -1.83
CDH13P55290 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH13P55290 RNU6-723P-201ENST00000383973 107 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AL049693.1-201ENST00000402760 611 ntBASIC3.62□□□□□ -1.83
CDH13P55290 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH13P55290 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH13P55290 RN7SKP266-201ENST00000410232 287 ntBASIC3.62□□□□□ -1.83
CDH13P55290 HMGB3P20-201ENST00000417997 600 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AL137014.1-201ENST00000420490 1226 ntBASIC3.62□□□□□ -1.83
CDH13P55290 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.62□□□□□ -1.83
CDH13P55290 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH13P55290 MTND4P20-201ENST00000424125 869 ntBASIC3.62□□□□□ -1.83
CDH13P55290 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH13P55290 RPS6P15-201ENST00000431996 751 ntBASIC3.62□□□□□ -1.83
CDH13P55290 RPL7P34-201ENST00000433316 712 ntBASIC3.62□□□□□ -1.83
CDH13P55290 UBE2FP3-201ENST00000436366 524 ntBASIC3.62□□□□□ -1.83
CDH13P55290 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH13P55290 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH13P55290 NANOGP10-201ENST00000453325 895 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH13P55290 UBDP1-202ENST00000457888 382 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH13P55290 AC093267.1-201ENST00000489176 961 ntBASIC3.62□□□□□ -1.83
CDH13P55290 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH13P55290 RN7SL323P-201ENST00000494712 295 ntBASIC3.62□□□□□ -1.83
CDH13P55290 NIPA2P2-201ENST00000496376 1083 ntBASIC3.62□□□□□ -1.83
CDH13P55290 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.62□□□□□ -1.83
CDH13P55290 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH13P55290 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH13P55290 NDUFB4P9-201ENST00000511646 388 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms