Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MTND4LP24-201ENST00000572277 291 ntBASIC3.59□□□□□ -1.83
MSH6P52701 MIR4635-201ENST00000583759 79 ntBASIC3.59□□□□□ -1.83
MSH6P52701 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.59□□□□□ -1.83
MSH6P52701 AC099778.2-201ENST00000610904 211 ntBASIC3.59□□□□□ -1.83
MSH6P52701 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.59□□□□□ -1.83
MSH6P52701 AL353997.5-201ENST00000618886 171 ntBASIC3.59□□□□□ -1.83
MSH6P52701 AC090617.9-201ENST00000623751 147 ntBASIC3.59□□□□□ -1.83
MSH6P52701 OR4G2P-202ENST00000641004 1759 ntBASIC3.58□□□□□ -1.84
MSH6P52701 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MSH6P52701 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MSH6P52701 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.58□□□□□ -1.84
MSH6P52701 RNU6-253P-201ENST00000384730 105 ntBASIC3.58□□□□□ -1.84
MSH6P52701 AC007064.1-201ENST00000412238 351 ntBASIC3.58□□□□□ -1.84
MSH6P52701 NDUFB4P5-201ENST00000415445 361 ntBASIC3.58□□□□□ -1.84
MSH6P52701 FO393419.3-201ENST00000428741 282 ntBASIC3.58□□□□□ -1.84
MSH6P52701 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
MSH6P52701 AL691517.1-201ENST00000440833 1235 ntBASIC3.58□□□□□ -1.84
MSH6P52701 BTBD7P2-201ENST00000441962 620 ntBASIC3.58□□□□□ -1.84
MSH6P52701 AL592437.1-201ENST00000443781 492 ntBASIC3.58□□□□□ -1.84
MSH6P52701 AL500527.1-201ENST00000448532 255 ntBASIC3.58□□□□□ -1.84
MSH6P52701 RPL23AP31-201ENST00000456160 467 ntBASIC3.58□□□□□ -1.84
MSH6P52701 AC234781.5-201ENST00000508429 271 ntBASIC3.58□□□□□ -1.84
MSH6P52701 AC103833.1-201ENST00000517442 172 ntBASIC3.58□□□□□ -1.84
MSH6P52701 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
MSH6P52701 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.58□□□□□ -1.84
MSH6P52701 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.58□□□□□ -1.84
MSH6P52701 MIR4458-201ENST00000578872 75 ntBASIC3.58□□□□□ -1.84
MSH6P52701 AC083760.1-201ENST00000589621 670 ntBASIC3.58□□□□□ -1.84
MSH6P52701 AC135178.6-201ENST00000605314 398 ntBASIC3.58□□□□□ -1.84
MSH6P52701 AC090115.4-201ENST00000609970 188 ntBASIC3.58□□□□□ -1.84
MSH6P52701 MTND5P19-201ENST00000424872 1794 ntBASIC3.58□□□□□ -1.84
MSH6P52701 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MSH6P52701 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.57□□□□□ -1.84
MSH6P52701 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MSH6P52701 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
MSH6P52701 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
MSH6P52701 RNU6-76P-201ENST00000384060 104 ntBASIC3.57□□□□□ -1.84
MSH6P52701 AL079342.1-201ENST00000401460 267 ntBASIC3.57□□□□□ -1.84
MSH6P52701 XKRYP4-201ENST00000414395 483 ntBASIC3.57□□□□□ -1.84
MSH6P52701 ARL2BPP3-201ENST00000421226 480 ntBASIC3.57□□□□□ -1.84
MSH6P52701 MTCO3P43-201ENST00000440974 771 ntBASIC3.57□□□□□ -1.84
MSH6P52701 AL353093.1-201ENST00000441292 436 ntBASIC3.57□□□□□ -1.84
MSH6P52701 XKRYP5-201ENST00000449659 483 ntBASIC3.57□□□□□ -1.84
MSH6P52701 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.57□□□□□ -1.84
MSH6P52701 AC008280.2-201ENST00000455473 307 ntBASIC3.57□□□□□ -1.84
MSH6P52701 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
MSH6P52701 AC010683.1-201ENST00000473673 378 ntBASIC3.57□□□□□ -1.84
MSH6P52701 RN7SKP31-201ENST00000516354 278 ntBASIC3.57□□□□□ -1.84
MSH6P52701 SNORA31.13-201ENST00000516624 135 ntBASIC3.57□□□□□ -1.84
MSH6P52701 RN7SKP282-201ENST00000516824 299 ntBASIC3.57□□□□□ -1.84
MSH6P52701 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.57□□□□□ -1.84
MSH6P52701 AP000867.2-201ENST00000532468 320 ntBASIC3.57□□□□□ -1.84
MSH6P52701 AC055876.1-202ENST00000567053 138 ntBASIC3.57□□□□□ -1.84
MSH6P52701 AC233266.2-201ENST00000567067 528 ntBASIC3.57□□□□□ -1.84
MSH6P52701 AP003117.1-201ENST00000602771 554 ntBASIC3.57□□□□□ -1.84
MSH6P52701 AC016727.1-205ENST00000605437 569 ntBASIC3.57□□□□□ -1.84
MSH6P52701 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MSH6P52701 AL118556.2-201ENST00000614375 824 ntBASIC3.57□□□□□ -1.84
MSH6P52701 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.57□□□□□ -1.84
MSH6P52701 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MSH6P52701 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MSH6P52701 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.56□□□□□ -1.84
MSH6P52701 U3.15-201ENST00000365398 212 ntBASIC3.56□□□□□ -1.84
MSH6P52701 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.56□□□□□ -1.84
MSH6P52701 MIR181B1-201ENST00000385240 110 ntBASIC3.56□□□□□ -1.84
MSH6P52701 NANOGP5-201ENST00000424456 877 ntBASIC3.56□□□□□ -1.84
MSH6P52701 FAM204CP-201ENST00000424489 642 ntBASIC3.56□□□□□ -1.84
MSH6P52701 MORF4L1P7-201ENST00000426038 703 ntBASIC3.56□□□□□ -1.84
MSH6P52701 MTCO1P39-201ENST00000426148 480 ntBASIC3.56□□□□□ -1.84
MSH6P52701 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH6P52701 VDAC1P3-201ENST00000434069 851 ntBASIC3.56□□□□□ -1.84
MSH6P52701 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH6P52701 RPS12P2-201ENST00000439728 269 ntBASIC3.56□□□□□ -1.84
MSH6P52701 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.56□□□□□ -1.84
MSH6P52701 AL662791.1-201ENST00000441992 928 ntBASIC3.56□□□□□ -1.84
MSH6P52701 AC096638.1-201ENST00000444678 216 ntBASIC3.56□□□□□ -1.84
MSH6P52701 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH6P52701 MTND2P6-201ENST00000455337 1030 ntBASIC3.56□□□□□ -1.84
MSH6P52701 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.56□□□□□ -1.84
MSH6P52701 AC023050.1-201ENST00000498198 304 ntBASIC3.56□□□□□ -1.84
MSH6P52701 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.56□□□□□ -1.84
MSH6P52701 AC074029.1-201ENST00000552531 1044 ntBASIC3.56□□□□□ -1.84
MSH6P52701 POLR2KP1-201ENST00000553226 168 ntBASIC3.56□□□□□ -1.84
MSH6P52701 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH6P52701 AL354696.1-201ENST00000614652 497 ntBASIC3.56□□□□□ -1.84
MSH6P52701 MTND4P31-201ENST00000425607 1343 ntBASIC3.56□□□□□ -1.84
MSH6P52701 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
MSH6P52701 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MSH6P52701 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MSH6P52701 RNU2-17P-201ENST00000410290 190 ntBASIC3.55□□□□□ -1.84
MSH6P52701 AC069218.2-201ENST00000411665 344 ntBASIC3.55□□□□□ -1.84
MSH6P52701 AC007000.2-201ENST00000442564 487 ntBASIC3.55□□□□□ -1.84
MSH6P52701 HMGN2P23-201ENST00000456759 269 ntBASIC3.55□□□□□ -1.84
MSH6P52701 AC011037.1-201ENST00000483964 558 ntBASIC3.55□□□□□ -1.84
MSH6P52701 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MSH6P52701 AC025918.2-201ENST00000558683 763 ntBASIC3.55□□□□□ -1.84
MSH6P52701 NRBF2P1-201ENST00000587407 859 ntBASIC3.55□□□□□ -1.84
MSH6P52701 AC115085.1-201ENST00000588924 229 ntBASIC3.55□□□□□ -1.84
MSH6P52701 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.55□□□□□ -1.84
MSH6P52701 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms