Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC078880.5-201ENST00000617845 421 ntBASIC3.09□□□□□ -1.91
RORAP35398 AC098679.5-201ENST00000624394 571 ntBASIC3.09□□□□□ -1.91
RORAP35398 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.09□□□□□ -1.91
RORAP35398 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.09□□□□□ -1.91
RORAP35398 AL645568.2-201ENST00000432815 1337 ntBASIC3.09□□□□□ -1.91
RORAP35398 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RORAP35398 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.09□□□□□ -1.92
RORAP35398 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
RORAP35398 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RORAP35398 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.08□□□□□ -1.92
RORAP35398 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RORAP35398 RNVU1-3-201ENST00000364313 161 ntBASIC3.08□□□□□ -1.92
RORAP35398 RNA5SP229-201ENST00000410809 99 ntBASIC3.08□□□□□ -1.92
RORAP35398 RNU6-575P-201ENST00000411326 105 ntBASIC3.08□□□□□ -1.92
RORAP35398 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.08□□□□□ -1.92
RORAP35398 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.08□□□□□ -1.92
RORAP35398 MRPL50P2-201ENST00000416821 482 ntBASIC3.08□□□□□ -1.92
RORAP35398 AC027644.1-201ENST00000419595 298 ntBASIC3.08□□□□□ -1.92
RORAP35398 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.08□□□□□ -1.92
RORAP35398 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.08□□□□□ -1.92
RORAP35398 AC233728.2-201ENST00000425348 757 ntBASIC3.08□□□□□ -1.92
RORAP35398 BX890604.2-201ENST00000427883 474 ntBASIC3.08□□□□□ -1.92
RORAP35398 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.08□□□□□ -1.92
RORAP35398 AC234064.1-201ENST00000436312 247 ntBASIC3.08□□□□□ -1.92
RORAP35398 RABEPKP1-201ENST00000440529 1026 ntBASIC3.08□□□□□ -1.92
RORAP35398 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.08□□□□□ -1.92
RORAP35398 AL671855.1-201ENST00000446875 1203 ntBASIC3.08□□□□□ -1.92
RORAP35398 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.08□□□□□ -1.92
RORAP35398 ELOCP23-201ENST00000452014 332 ntBASIC3.08□□□□□ -1.92
RORAP35398 AP001992.1-205ENST00000462248 379 ntBASIC3.08□□□□□ -1.92
RORAP35398 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
RORAP35398 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.08□□□□□ -1.92
RORAP35398 GAPDHP39-201ENST00000481866 979 ntBASIC3.08□□□□□ -1.92
RORAP35398 AC006445.1-201ENST00000491925 405 ntBASIC3.08□□□□□ -1.92
RORAP35398 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.08□□□□□ -1.92
RORAP35398 AC119751.1-201ENST00000513357 765 ntBASIC3.08□□□□□ -1.92
RORAP35398 GMPSP1-201ENST00000514075 579 ntBASIC3.08□□□□□ -1.92
RORAP35398 MTCO3P27-201ENST00000514397 196 ntBASIC3.08□□□□□ -1.92
RORAP35398 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.08□□□□□ -1.92
RORAP35398 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.08□□□□□ -1.92
RORAP35398 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.08□□□□□ -1.92
RORAP35398 AC022690.1-201ENST00000526681 550 ntBASIC3.08□□□□□ -1.92
RORAP35398 AC006518.2-201ENST00000542513 940 ntBASIC3.08□□□□□ -1.92
RORAP35398 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.08□□□□□ -1.92
RORAP35398 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.08□□□□□ -1.92
RORAP35398 AC008507.1-201ENST00000587506 734 ntBASIC3.08□□□□□ -1.92
RORAP35398 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.08□□□□□ -1.92
RORAP35398 AL513477.2-201ENST00000607858 568 ntBASIC3.08□□□□□ -1.92
RORAP35398 AC004832.5-201ENST00000608677 401 ntBASIC3.08□□□□□ -1.92
RORAP35398 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.08□□□□□ -1.92
RORAP35398 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RORAP35398 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.08□□□□□ -1.92
RORAP35398 AC068722.2-201ENST00000618734 544 ntBASIC3.08□□□□□ -1.92
RORAP35398 AC093875.1-201ENST00000623688 504 ntBASIC3.08□□□□□ -1.92
RORAP35398 AC090897.3-201ENST00000636973 1157 ntBASIC3.08□□□□□ -1.92
RORAP35398 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
RORAP35398 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RORAP35398 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
RORAP35398 AP002907.1-201ENST00000606361 1430 ntBASIC3.08□□□□□ -1.92
RORAP35398 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RORAP35398 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RORAP35398 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.07□□□□□ -1.92
RORAP35398 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.07□□□□□ -1.92
RORAP35398 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RORAP35398 MIR649-201ENST00000384843 97 ntBASIC3.07□□□□□ -1.92
RORAP35398 MTCO2P31-201ENST00000402702 684 ntBASIC3.07□□□□□ -1.92
RORAP35398 AC092638.1-201ENST00000411966 1275 ntBASIC3.07□□□□□ -1.92
RORAP35398 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.07□□□□□ -1.92
RORAP35398 SFR1P2-201ENST00000421841 730 ntBASIC3.07□□□□□ -1.92
RORAP35398 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.07□□□□□ -1.92
RORAP35398 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.07□□□□□ -1.92
RORAP35398 RPL27AP5-201ENST00000469428 449 ntBASIC3.07□□□□□ -1.92
RORAP35398 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.07□□□□□ -1.92
RORAP35398 RPS26P21-201ENST00000475397 348 ntBASIC3.07□□□□□ -1.92
RORAP35398 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.07□□□□□ -1.92
RORAP35398 MTCO3P44-201ENST00000510977 541 ntBASIC3.07□□□□□ -1.92
RORAP35398 AC109471.1-201ENST00000511631 612 ntBASIC3.07□□□□□ -1.92
RORAP35398 MIR2276-201ENST00000516886 89 ntBASIC3.07□□□□□ -1.92
RORAP35398 AP003355.1-201ENST00000518956 587 ntBASIC3.07□□□□□ -1.92
RORAP35398 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.07□□□□□ -1.92
RORAP35398 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.07□□□□□ -1.92
RORAP35398 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.07□□□□□ -1.92
RORAP35398 ZNF971P-201ENST00000562068 1249 ntBASIC3.07□□□□□ -1.92
RORAP35398 MTND4LP25-201ENST00000570218 163 ntBASIC3.07□□□□□ -1.92
RORAP35398 MIR2682-201ENST00000580305 110 ntBASIC3.07□□□□□ -1.92
RORAP35398 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.07□□□□□ -1.92
RORAP35398 AF131215.7-201ENST00000602443 707 ntBASIC3.07□□□□□ -1.92
RORAP35398 AC025588.3-201ENST00000604182 274 ntBASIC3.07□□□□□ -1.92
RORAP35398 AC128687.1-201ENST00000605304 619 ntBASIC3.07□□□□□ -1.92
RORAP35398 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.07□□□□□ -1.92
RORAP35398 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.07□□□□□ -1.92
RORAP35398 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.07□□□□□ -1.92
RORAP35398 AL353743.1-202ENST00000431724 1695 ntBASIC3.07□□□□□ -1.92
RORAP35398 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.07□□□□□ -1.92
RORAP35398 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
RORAP35398 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RORAP35398 MIR148B-201ENST00000362252 99 ntBASIC3.06□□□□□ -1.92
RORAP35398 SNORA63.3-201ENST00000362682 132 ntBASIC3.06□□□□□ -1.92
RORAP35398 RNU5B-1-201ENST00000363286 116 ntBASIC3.06□□□□□ -1.92
RORAP35398 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms