Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RNU2-15P-201ENST00000410692 191 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.69□□□□□ -1.82
PTPN3P26045 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTPN3P26045 AC093698.1-201ENST00000423843 571 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AC006989.1-201ENST00000427212 131 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 RPL7P34-201ENST00000433316 712 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 HMGB1P15-201ENST00000453854 435 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.69□□□□□ -1.82
PTPN3P26045 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.69□□□□□ -1.82
PTPN3P26045 RPS3AP50-201ENST00000487064 803 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.69□□□□□ -1.82
PTPN3P26045 AC006390.1-201ENST00000508068 283 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 XKRY-201ENST00000510392 1100 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.69□□□□□ -1.82
PTPN3P26045 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.69□□□□□ -1.82
PTPN3P26045 DEFB131D-201ENST00000526803 184 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 UBTFL10-201ENST00000528532 562 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AC018630.1-201ENST00000541376 925 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.69□□□□□ -1.82
PTPN3P26045 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.69□□□□□ -1.82
PTPN3P26045 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.69□□□□□ -1.82
PTPN3P26045 AC006077.1-201ENST00000604746 343 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AC006270.3-201ENST00000605967 1036 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.69□□□□□ -1.82
PTPN3P26045 AC231657.1-201ENST00000624313 397 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AC079416.3-201ENST00000624479 549 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AC091925.2-201ENST00000625059 256 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.69□□□□□ -1.82
PTPN3P26045 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.69□□□□□ -1.82
PTPN3P26045 AC119674.1-207ENST00000641355 633 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.69□□□□□ -1.82
PTPN3P26045 AL672296.1-201ENST00000427780 2158 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 AP002907.1-201ENST00000606361 1430 ntBASIC3.69□□□□□ -1.82
PTPN3P26045 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN3P26045 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PTPN3P26045 AC010733.2-201ENST00000589496 5702 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN3P26045 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN3P26045 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN3P26045 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN3P26045 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN3P26045 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTPN3P26045 RNA5SP51-201ENST00000364750 119 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN3P26045 RNA5SP129-201ENST00000410276 118 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN3P26045 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN3P26045 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN3P26045 GLRXP1-201ENST00000423261 334 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AC002075.2-201ENST00000425207 252 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN3P26045 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN3P26045 CETN4P-201ENST00000432407 469 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN3P26045 NOTCH2P1-201ENST00000443481 624 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AL606662.1-201ENST00000445763 553 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 ARPC3P5-201ENST00000448802 534 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 RPL7P52-201ENST00000449200 742 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN3P26045 AL445669.2-201ENST00000454425 421 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 HMGN2P16-201ENST00000456802 261 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AC097493.1-201ENST00000463958 372 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 HMGB1P25-201ENST00000468402 607 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AC084357.1-201ENST00000473404 255 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AC068587.2-201ENST00000478386 781 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPN3P26045 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.68□□□□□ -1.82
PTPN3P26045 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN3P26045 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.68□□□□□ -1.82
PTPN3P26045 RNU6-1129P-201ENST00000515964 104 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 RNA5SP468-201ENST00000516782 93 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 RNU6-579P-201ENST00000516879 102 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 RN7SKP289-201ENST00000517244 295 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 ZNF321P-202ENST00000550843 495 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.68□□□□□ -1.82
PTPN3P26045 CYCSP2-201ENST00000558168 301 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AC090888.2-201ENST00000559765 1144 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 MIR4738-201ENST00000579134 87 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AL031281.1-201ENST00000604049 488 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 ELOCP35-201ENST00000604289 336 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPN3P26045 AC025588.4-201ENST00000615802 908 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN3P26045 AP003485.2-201ENST00000623636 610 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AC017037.3-201ENST00000625016 472 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
PTPN3P26045 SGO1P2-201ENST00000429458 1589 ntBASIC3.68□□□□□ -1.82
PTPN3P26045 AL391994.1-201ENST00000254724 282 ntBASIC3.67□□□□□ -1.82
PTPN3P26045 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN3P26045 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN3P26045 AL138878.1-201ENST00000405131 347 ntBASIC3.67□□□□□ -1.82
PTPN3P26045 RAP1BP1-201ENST00000412709 553 ntBASIC3.67□□□□□ -1.82
PTPN3P26045 AL953862.1-201ENST00000423016 168 ntBASIC3.67□□□□□ -1.82
PTPN3P26045 TXNL1P1-201ENST00000429528 554 ntBASIC3.67□□□□□ -1.82
PTPN3P26045 MTND4LP10-201ENST00000435146 291 ntBASIC3.67□□□□□ -1.82
PTPN3P26045 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPN3P26045 AL662791.1-201ENST00000441992 928 ntBASIC3.67□□□□□ -1.82
PTPN3P26045 MTCYBP3-201ENST00000445588 1137 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms