Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD40P25942 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD40P25942 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 Y_RNA.231-201ENST00000364358 102 ntBASIC4.42□□□□□ -1.7
CD40P25942 RNU4-66P-201ENST00000365199 138 ntBASIC4.42□□□□□ -1.7
CD40P25942 RNU6-61P-201ENST00000365528 109 ntBASIC4.42□□□□□ -1.7
CD40P25942 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 Y_RNA.529-201ENST00000384586 119 ntBASIC4.42□□□□□ -1.7
CD40P25942 SNORA66-201ENST00000384792 133 ntBASIC4.42□□□□□ -1.7
CD40P25942 RNU6-882P-201ENST00000391025 103 ntBASIC4.42□□□□□ -1.7
CD40P25942 RNA5SP241-201ENST00000391326 114 ntBASIC4.42□□□□□ -1.7
CD40P25942 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD40P25942 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 RNU2-29P-201ENST00000410423 189 ntBASIC4.42□□□□□ -1.7
CD40P25942 AC009161.1-201ENST00000417306 376 ntBASIC4.42□□□□□ -1.7
CD40P25942 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 PDCL2P1-201ENST00000419302 352 ntBASIC4.42□□□□□ -1.7
CD40P25942 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 RPL35AP12-201ENST00000425362 338 ntBASIC4.42□□□□□ -1.7
CD40P25942 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 AL360081.1-201ENST00000428299 555 ntBASIC4.42□□□□□ -1.7
CD40P25942 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40P25942 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 RPL21P133-201ENST00000443666 476 ntBASIC4.42□□□□□ -1.7
CD40P25942 MED28P3-201ENST00000444288 531 ntBASIC4.42□□□□□ -1.7
CD40P25942 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.42□□□□□ -1.7
CD40P25942 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 HMGN2P26-201ENST00000463169 339 ntBASIC4.42□□□□□ -1.7
CD40P25942 AC090602.1-201ENST00000469695 252 ntBASIC4.42□□□□□ -1.7
CD40P25942 VN1R105P-201ENST00000486595 910 ntBASIC4.42□□□□□ -1.7
CD40P25942 BTF3P12-201ENST00000519620 469 ntBASIC4.42□□□□□ -1.7
CD40P25942 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 AP006245.2-201ENST00000522004 300 ntBASIC4.42□□□□□ -1.7
CD40P25942 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 AC018630.1-201ENST00000541376 925 ntBASIC4.42□□□□□ -1.7
CD40P25942 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40P25942 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40P25942 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40P25942 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 AL670379.6-201ENST00000603753 252 ntBASIC4.42□□□□□ -1.7
CD40P25942 AL670379.11-201ENST00000604059 253 ntBASIC4.42□□□□□ -1.7
CD40P25942 AC008162.1-201ENST00000604718 254 ntBASIC4.42□□□□□ -1.7
CD40P25942 AL670379.1-201ENST00000604752 252 ntBASIC4.42□□□□□ -1.7
CD40P25942 AL670379.5-201ENST00000605253 252 ntBASIC4.42□□□□□ -1.7
CD40P25942 AL670379.12-201ENST00000605291 253 ntBASIC4.42□□□□□ -1.7
CD40P25942 AL670379.8-201ENST00000605353 252 ntBASIC4.42□□□□□ -1.7
CD40P25942 AL670379.7-201ENST00000605823 252 ntBASIC4.42□□□□□ -1.7
CD40P25942 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.42□□□□□ -1.7
CD40P25942 Mico1.1-201ENST00000611698 204 ntBASIC4.42□□□□□ -1.7
CD40P25942 AL627230.1-201ENST00000613077 211 ntBASIC4.42□□□□□ -1.7
CD40P25942 AC093913.1-201ENST00000614178 329 ntBASIC4.42□□□□□ -1.7
CD40P25942 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 AL591926.8-201ENST00000616876 211 ntBASIC4.42□□□□□ -1.7
CD40P25942 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD40P25942 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD40P25942 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40P25942 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40P25942 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD40P25942 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD40P25942 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40P25942 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD40P25942 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CD40P25942 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD40P25942 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.41□□□□□ -1.7
CD40P25942 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD40P25942 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
CD40P25942 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CD40P25942 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CD40P25942 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CD40P25942 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
CD40P25942 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD40P25942 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD40P25942 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CD40P25942 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD40P25942 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.41□□□□□ -1.7
CD40P25942 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD40P25942 RN7SKP104-201ENST00000362605 328 ntBASIC4.41□□□□□ -1.7
CD40P25942 Y_RNA.813-201ENST00000364639 102 ntBASIC4.41□□□□□ -1.7
CD40P25942 SNORD81.2-201ENST00000365153 76 ntBASIC4.41□□□□□ -1.7
CD40P25942 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CD40P25942 RNU6-701P-201ENST00000384059 107 ntBASIC4.41□□□□□ -1.7
CD40P25942 MIR514A2-201ENST00000385131 88 ntBASIC4.41□□□□□ -1.7
CD40P25942 MIR514A3-201ENST00000385132 88 ntBASIC4.41□□□□□ -1.7
CD40P25942 ADAM24P-201ENST00000398655 2101 ntBASIC4.41□□□□□ -1.7
CD40P25942 AC110754.1-201ENST00000399740 601 ntBASIC4.41□□□□□ -1.7
CD40P25942 AL359643.1-201ENST00000404109 423 ntBASIC4.41□□□□□ -1.7
CD40P25942 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.41□□□□□ -1.7
CD40P25942 AL161631.1-201ENST00000417933 486 ntBASIC4.41□□□□□ -1.7
CD40P25942 AC068533.1-201ENST00000418542 415 ntBASIC4.41□□□□□ -1.7
CD40P25942 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.41□□□□□ -1.7
CD40P25942 PPP1R11P2-201ENST00000423543 382 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms