Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.06□□□□□ -1.76
BDNFP23560 AL035246.1-201ENST00000433554 1255 ntBASIC4.06□□□□□ -1.76
BDNFP23560 GOT2P5-201ENST00000433995 546 ntBASIC4.06□□□□□ -1.76
BDNFP23560 NOTCH2P1-201ENST00000443481 624 ntBASIC4.06□□□□□ -1.76
BDNFP23560 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.06□□□□□ -1.76
BDNFP23560 U8.18-201ENST00000459285 133 ntBASIC4.06□□□□□ -1.76
BDNFP23560 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.06□□□□□ -1.76
BDNFP23560 AC006483.1-201ENST00000487308 313 ntBASIC4.06□□□□□ -1.76
BDNFP23560 AC108729.1-201ENST00000487812 947 ntBASIC4.06□□□□□ -1.76
BDNFP23560 KCTD9P5-201ENST00000504141 1170 ntBASIC4.06□□□□□ -1.76
BDNFP23560 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.06□□□□□ -1.76
BDNFP23560 RNA5SP216-201ENST00000516111 123 ntBASIC4.06□□□□□ -1.76
BDNFP23560 RNU6-528P-201ENST00000516926 100 ntBASIC4.06□□□□□ -1.76
BDNFP23560 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.06□□□□□ -1.76
BDNFP23560 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.06□□□□□ -1.76
BDNFP23560 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.06□□□□□ -1.76
BDNFP23560 MIR3158-1-201ENST00000583596 81 ntBASIC4.06□□□□□ -1.76
BDNFP23560 AC079089.3-201ENST00000603094 673 ntBASIC4.06□□□□□ -1.76
BDNFP23560 AC245389.1-201ENST00000605141 529 ntBASIC4.06□□□□□ -1.76
BDNFP23560 AC245297.2-201ENST00000610119 565 ntBASIC4.06□□□□□ -1.76
BDNFP23560 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.06□□□□□ -1.76
BDNFP23560 AC006133.1-201ENST00000617106 264 ntBASIC4.06□□□□□ -1.76
BDNFP23560 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.06□□□□□ -1.76
BDNFP23560 AC002550.2-201ENST00000621246 394 ntBASIC4.06□□□□□ -1.76
BDNFP23560 CR392039.5-201ENST00000623201 510 ntBASIC4.06□□□□□ -1.76
BDNFP23560 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.06□□□□□ -1.76
BDNFP23560 AC011460.1-201ENST00000636268 1834 ntBASIC4.06□□□□□ -1.76
BDNFP23560 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
BDNFP23560 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
BDNFP23560 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
BDNFP23560 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BDNFP23560 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BDNFP23560 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.05□□□□□ -1.76
BDNFP23560 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BDNFP23560 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.05□□□□□ -1.76
BDNFP23560 AL022578.1-201ENST00000439330 1433 ntBASIC4.05□□□□□ -1.76
BDNFP23560 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
BDNFP23560 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BDNFP23560 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
BDNFP23560 Y_RNA.234-201ENST00000364409 97 ntBASIC4.05□□□□□ -1.76
BDNFP23560 Y_RNA.408-201ENST00000383987 102 ntBASIC4.05□□□□□ -1.76
BDNFP23560 SAR1AP2-201ENST00000392696 594 ntBASIC4.05□□□□□ -1.76
BDNFP23560 RPS3AP24-201ENST00000407896 734 ntBASIC4.05□□□□□ -1.76
BDNFP23560 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.05□□□□□ -1.76
BDNFP23560 ATP5F1P1-201ENST00000433775 569 ntBASIC4.05□□□□□ -1.76
BDNFP23560 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.05□□□□□ -1.76
BDNFP23560 SDR42E1P3-201ENST00000438345 502 ntBASIC4.05□□□□□ -1.76
BDNFP23560 RPL21P134-201ENST00000453468 483 ntBASIC4.05□□□□□ -1.76
BDNFP23560 USP9YP10-201ENST00000454868 628 ntBASIC4.05□□□□□ -1.76
BDNFP23560 ACTR3P3-201ENST00000480448 893 ntBASIC4.05□□□□□ -1.76
BDNFP23560 RPS26P15-201ENST00000488067 348 ntBASIC4.05□□□□□ -1.76
BDNFP23560 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.05□□□□□ -1.76
BDNFP23560 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.05□□□□□ -1.76
BDNFP23560 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.05□□□□□ -1.76
BDNFP23560 AC026726.1-201ENST00000512859 601 ntBASIC4.05□□□□□ -1.76
BDNFP23560 SNORA67.7-201ENST00000516664 135 ntBASIC4.05□□□□□ -1.76
BDNFP23560 HMGN1P28-201ENST00000521340 364 ntBASIC4.05□□□□□ -1.76
BDNFP23560 PDCL2P2-201ENST00000533651 189 ntBASIC4.05□□□□□ -1.76
BDNFP23560 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.05□□□□□ -1.76
BDNFP23560 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.05□□□□□ -1.76
BDNFP23560 OR4T1P-201ENST00000554933 911 ntBASIC4.05□□□□□ -1.76
BDNFP23560 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.05□□□□□ -1.76
BDNFP23560 AC141257.3-201ENST00000572906 215 ntBASIC4.05□□□□□ -1.76
BDNFP23560 AL353997.4-201ENST00000586196 166 ntBASIC4.05□□□□□ -1.76
BDNFP23560 AL031985.2-201ENST00000600955 480 ntBASIC4.05□□□□□ -1.76
BDNFP23560 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.05□□□□□ -1.76
BDNFP23560 RPP40P2-201ENST00000603596 712 ntBASIC4.05□□□□□ -1.76
BDNFP23560 AC006213.4-201ENST00000616184 634 ntBASIC4.05□□□□□ -1.76
BDNFP23560 AC233309.1-201ENST00000619522 751 ntBASIC4.05□□□□□ -1.76
BDNFP23560 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.05□□□□□ -1.76
BDNFP23560 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BDNFP23560 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.05□□□□□ -1.76
BDNFP23560 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
BDNFP23560 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
BDNFP23560 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BDNFP23560 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BDNFP23560 RNU6-97P-201ENST00000363387 104 ntBASIC4.04□□□□□ -1.76
BDNFP23560 SNORA14A-201ENST00000364773 135 ntBASIC4.04□□□□□ -1.76
BDNFP23560 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BDNFP23560 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
BDNFP23560 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
BDNFP23560 SOD2P1-201ENST00000396543 562 ntBASIC4.04□□□□□ -1.76
BDNFP23560 ATP5F1P3-201ENST00000397213 657 ntBASIC4.04□□□□□ -1.76
BDNFP23560 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.04□□□□□ -1.76
BDNFP23560 AL139247.1-201ENST00000422768 325 ntBASIC4.04□□□□□ -1.76
BDNFP23560 AL591419.1-201ENST00000427423 339 ntBASIC4.04□□□□□ -1.76
BDNFP23560 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.04□□□□□ -1.76
BDNFP23560 AC018644.1-201ENST00000429934 551 ntBASIC4.04□□□□□ -1.76
BDNFP23560 MTCYBP45-201ENST00000435243 565 ntBASIC4.04□□□□□ -1.76
BDNFP23560 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.04□□□□□ -1.76
BDNFP23560 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.04□□□□□ -1.76
BDNFP23560 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.04□□□□□ -1.76
BDNFP23560 OR10R1P-201ENST00000441524 1141 ntBASIC4.04□□□□□ -1.76
BDNFP23560 PAXBP1P1-201ENST00000449315 447 ntBASIC4.04□□□□□ -1.76
BDNFP23560 AL359385.1-201ENST00000456509 365 ntBASIC4.04□□□□□ -1.76
BDNFP23560 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.04□□□□□ -1.76
BDNFP23560 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.04□□□□□ -1.76
BDNFP23560 AC017037.2-201ENST00000513850 890 ntBASIC4.04□□□□□ -1.76
BDNFP23560 RNY4P37-201ENST00000516225 96 ntBASIC4.04□□□□□ -1.76
BDNFP23560 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms