Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HMGA1P17096 AC005189.1-201ENST00000431286 310 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 ATP5F1P1-201ENST00000433775 569 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 AL138799.3-201ENST00000438968 350 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGA1P17096 AC092754.2-201ENST00000463506 460 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGA1P17096 AC012170.1-201ENST00000495139 359 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 MTCO1P30-201ENST00000515244 580 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGA1P17096 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGA1P17096 LRRC37A5P-203ENST00000580181 585 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 AC090312.2-201ENST00000582687 378 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 AC123786.2-201ENST00000603459 275 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGA1P17096 AC048347.1-201ENST00000624621 427 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 PISRT1-201ENST00000626175 531 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 AC026634.1-201ENST00000634369 198 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HMGA1P17096 MAPK10-322ENST00000641485 4530 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.06
HMGA1P17096 AL139811.1-201ENST00000424779 2299 ntBASIC2.21□□□□□ -2.06
HMGA1P17096 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGA1P17096 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HMGA1P17096 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HMGA1P17096 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HMGA1P17096 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
HMGA1P17096 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGA1P17096 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HMGA1P17096 SAR1AP2-201ENST00000392696 594 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 MTND4P13-201ENST00000402078 1023 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGA1P17096 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.2□□□□□ -2.06
HMGA1P17096 TRGV5P-201ENST00000419915 354 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC005005.2-201ENST00000420779 380 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGA1P17096 AC093392.2-201ENST00000450682 337 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 HMGB3P21-201ENST00000452483 547 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AL109741.2-201ENST00000455561 343 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC089999.1-201ENST00000460336 374 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.2□□□□□ -2.06
HMGA1P17096 AP000873.1-201ENST00000463987 400 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGA1P17096 TRBV1-201ENST00000476502 284 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC068587.2-201ENST00000478386 781 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC004263.1-201ENST00000479327 332 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 GAPDHP39-201ENST00000481866 979 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HMGA1P17096 RNA5SP402-201ENST00000517148 110 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGA1P17096 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGA1P17096 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGA1P17096 VN1R78P-201ENST00000597393 564 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC025811.1-201ENST00000604312 472 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC009318.2-201ENST00000610917 651 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC013562.2-201ENST00000611632 603 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC103798.2-201ENST00000624292 632 ntBASIC2.2□□□□□ -2.06
HMGA1P17096 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HMGA1P17096 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGA1P17096 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGA1P17096 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
HMGA1P17096 AL512646.1-201ENST00000269395 1077 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 OR56A5-201ENST00000340110 738 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HMGA1P17096 RNU6-1263P-201ENST00000384601 106 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 MIR764-201ENST00000390811 85 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 RNU6-603P-201ENST00000411403 107 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGA1P17096 RPL7P46-201ENST00000425129 740 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.19□□□□□ -2.06
HMGA1P17096 MTCO1P43-201ENST00000431831 488 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 AC004866.2-201ENST00000438285 481 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 CLIC4P1-201ENST00000453177 535 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 RPL21P99-201ENST00000480369 423 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 AC098799.2-201ENST00000509466 868 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 RNU2-58P-201ENST00000516403 183 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.19□□□□□ -2.06
HMGA1P17096 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HMGA1P17096 AL137847.3-201ENST00000611521 109 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HMGA1P17096 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.19□□□□□ -2.06
HMGA1P17096 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.19□□□□□ -2.06
HMGA1P17096 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HMGA1P17096 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.19□□□□□ -2.06
HMGA1P17096 MTND5P29-201ENST00000458676 1807 ntBASIC2.19□□□□□ -2.06
HMGA1P17096 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HMGA1P17096 AC110774.1-201ENST00000623567 2018 ntBASIC2.18□□□□□ -2.06
HMGA1P17096 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HMGA1P17096 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HMGA1P17096 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
HMGA1P17096 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGA1P17096 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGA1P17096 U3.37-201ENST00000408528 213 ntBASIC2.18□□□□□ -2.06
HMGA1P17096 AL139156.1-201ENST00000412785 841 ntBASIC2.18□□□□□ -2.06
HMGA1P17096 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGA1P17096 AL591719.1-201ENST00000444669 744 ntBASIC2.18□□□□□ -2.06
HMGA1P17096 AC027673.1-201ENST00000456245 405 ntBASIC2.18□□□□□ -2.06
HMGA1P17096 RPL38P4-201ENST00000502376 214 ntBASIC2.18□□□□□ -2.06
HMGA1P17096 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGA1P17096 AC135628.1-201ENST00000568867 534 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms