Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC4P09017 AC016716.1-201ENST00000265882 708 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 RNU1-140P-201ENST00000365040 165 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HOXC4P09017 MIR128-1-201ENST00000384921 82 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 ANAPC10P1-201ENST00000395991 556 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 RPL7P25-201ENST00000404151 721 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 NDUFB4P4-201ENST00000404822 243 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 SNORA11C-201ENST00000408532 129 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 UBE2V1P9-201ENST00000414760 368 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC4P09017 AL449283.1-202ENST00000418249 604 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC008173.1-201ENST00000418901 264 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC4P09017 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC4P09017 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC4P09017 MTND2P5-201ENST00000432656 1006 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC4P09017 RSL24D1P3-201ENST00000449255 495 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC4P09017 HMGN1P18-201ENST00000457642 277 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 PRDX3P4-201ENST00000470828 747 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC113420.1-201ENST00000507903 571 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXC4P09017 AC093752.1-206ENST00000511823 336 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 GMPSP1-201ENST00000514075 579 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 RNA5SP341-201ENST00000516261 117 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 RPL12P22-201ENST00000519073 490 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC4P09017 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXC4P09017 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC4P09017 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXC4P09017 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC4P09017 MTCYBP23-201ENST00000558717 1102 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 H3F3AP1-201ENST00000559984 334 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC010735.1-201ENST00000567305 1026 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 ATP5F1P7-201ENST00000567330 760 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 MIR4504-201ENST00000577413 92 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXC4P09017 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC4P09017 SNRPGP15-201ENST00000600149 222 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC234772.3-201ENST00000602277 528 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXC4P09017 AC093673.2-201ENST00000609674 331 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC100793.4-201ENST00000613683 429 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AL162274.2-201ENST00000614406 332 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AL355493.4-201ENST00000618530 292 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC4P09017 AC091903.1-201ENST00000624322 454 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 AC019226.2-201ENST00000625973 424 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC4P09017 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC4P09017 AL035425.3-201ENST00000564206 4996 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC4P09017 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXC4P09017 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HOXC4P09017 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXC4P09017 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXC4P09017 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HOXC4P09017 RNU5B-1-201ENST00000363286 116 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 SNORA51.2-201ENST00000364595 132 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AP002088.1-201ENST00000382740 395 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 UBA52P6-201ENST00000399822 382 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 NDUFB4P5-201ENST00000415445 361 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC4P09017 GTF2IP23-201ENST00000423746 351 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC4P09017 DPPA2P1-201ENST00000428060 556 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXC4P09017 YWHAZP8-201ENST00000436935 731 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC108734.1-201ENST00000439549 399 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC125238.1-201ENST00000448842 249 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AL096803.2-201ENST00000450032 677 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC091179.1-201ENST00000461606 579 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC015724.1-201ENST00000478577 156 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC4P09017 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXC4P09017 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC4P09017 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC4P09017 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXC4P09017 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXC4P09017 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC4P09017 RNU6-488P-201ENST00000515918 99 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC4P09017 AF279873.1-201ENST00000523393 313 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC4P09017 DUXAP5-201ENST00000529668 529 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.07□□□□□ -1.92
HOXC4P09017 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXC4P09017 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXC4P09017 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC4P09017 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC4P09017 MIR4789-201ENST00000577469 82 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.07□□□□□ -1.92
HOXC4P09017 AC011471.1-201ENST00000585766 187 ntBASIC3.07□□□□□ -1.92
HOXC4P09017 AC004223.2-201ENST00000590309 544 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms