Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SDCBPP1-201ENST00000440192 890 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.24□□□□□ -1.89
SFTPBP07988 AL358232.1-201ENST00000448030 501 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 AC092754.2-201ENST00000463506 460 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 AC091564.1-201ENST00000464563 479 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 RPL23AP14-201ENST00000468281 468 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.24□□□□□ -1.89
SFTPBP07988 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.24□□□□□ -1.89
SFTPBP07988 RAC1P2-201ENST00000511164 579 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 AC010587.2-201ENST00000511727 448 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.24□□□□□ -1.89
SFTPBP07988 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SFTPBP07988 SNORA31.8-201ENST00000516327 108 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 RNU6-352P-201ENST00000516908 107 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.24□□□□□ -1.89
SFTPBP07988 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.24□□□□□ -1.89
SFTPBP07988 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.24□□□□□ -1.89
SFTPBP07988 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.24□□□□□ -1.89
SFTPBP07988 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.24□□□□□ -1.89
SFTPBP07988 BDH2P1-201ENST00000602288 736 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 DUXAP11-201ENST00000603858 526 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 AL050303.3-201ENST00000613704 284 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 AC006213.4-201ENST00000616184 634 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 AL354798.1-201ENST00000622505 329 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.24□□□□□ -1.89
SFTPBP07988 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SFTPBP07988 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SFTPBP07988 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SFTPBP07988 MTND4P34-201ENST00000572715 1371 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 RIOK3P1-201ENST00000418778 1528 ntBASIC3.24□□□□□ -1.89
SFTPBP07988 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SFTPBP07988 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SFTPBP07988 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SFTPBP07988 RNA5SP97-201ENST00000365006 84 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.23□□□□□ -1.89
SFTPBP07988 RNU6-213P-201ENST00000384051 104 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 MIR135A2-201ENST00000384854 100 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 AL592310.1-201ENST00000414330 671 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SFTPBP07988 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 RPL21P109-201ENST00000422213 475 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 AC084290.1-201ENST00000434995 374 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 RAC1P7-201ENST00000445367 377 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 AC017015.1-201ENST00000477387 286 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 RN7SL323P-201ENST00000494712 295 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AL139099.1-201ENST00000497398 403 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 CBX3P3-201ENST00000508108 532 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AC105914.1-201ENST00000511798 226 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.23□□□□□ -1.89
SFTPBP07988 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 FABP5P12-201ENST00000515543 389 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SFTPBP07988 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.23□□□□□ -1.89
SFTPBP07988 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 NBEAP1-201ENST00000554452 979 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 AL121576.1-201ENST00000556055 276 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 MED28P6-201ENST00000558776 231 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AC009712.1-201ENST00000564938 316 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.23□□□□□ -1.89
SFTPBP07988 AC116096.1-201ENST00000566804 2314 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.23□□□□□ -1.89
SFTPBP07988 BBIP1P1-201ENST00000602999 279 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AL365503.1-201ENST00000605247 905 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AL596245.1-201ENST00000618994 362 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AC079684.1-201ENST00000621405 437 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 FP236240.3-201ENST00000623061 327 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 AP001002.2-201ENST00000625137 386 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 U6.98-201ENST00000637157 84 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 CRYM-AS1-204ENST00000637983 556 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SFTPBP07988 AP000776.1-201ENST00000530032 1663 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SFTPBP07988 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SFTPBP07988 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SFTPBP07988 PWAR6-201ENST00000552334 4618 ntBASIC3.23□□□□□ -1.89
SFTPBP07988 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPBP07988 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.22□□□□□ -1.89
SFTPBP07988 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SFTPBP07988 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPBP07988 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPBP07988 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPBP07988 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPBP07988 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPBP07988 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.22□□□□□ -1.89
SFTPBP07988 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPBP07988 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SFTPBP07988 MIR30B-201ENST00000384850 88 ntBASIC3.22□□□□□ -1.89
SFTPBP07988 RNU6-882P-201ENST00000391025 103 ntBASIC3.22□□□□□ -1.89
SFTPBP07988 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.22□□□□□ -1.89
SFTPBP07988 AL445584.1-201ENST00000431451 330 ntBASIC3.22□□□□□ -1.89
SFTPBP07988 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.22□□□□□ -1.89
SFTPBP07988 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.22□□□□□ -1.89
SFTPBP07988 AL606517.1-201ENST00000446914 387 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms