Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC126124.2-201ENST00000413542 321 ntBASIC3.64□□□□□ -1.83
VTNP04004 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.64□□□□□ -1.83
VTNP04004 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 OR51AB1P-201ENST00000429046 620 ntBASIC3.64□□□□□ -1.83
VTNP04004 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.64□□□□□ -1.83
VTNP04004 AL008629.1-201ENST00000438615 184 ntBASIC3.64□□□□□ -1.83
VTNP04004 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 AL671855.1-201ENST00000446875 1203 ntBASIC3.64□□□□□ -1.83
VTNP04004 AC008264.1-201ENST00000447612 367 ntBASIC3.64□□□□□ -1.83
VTNP04004 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 MTCO3P16-201ENST00000454456 754 ntBASIC3.64□□□□□ -1.83
VTNP04004 AC010301.1-201ENST00000473936 355 ntBASIC3.64□□□□□ -1.83
VTNP04004 RPL7P18-201ENST00000478965 734 ntBASIC3.64□□□□□ -1.83
VTNP04004 MTND2P14-201ENST00000482139 351 ntBASIC3.64□□□□□ -1.83
VTNP04004 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 AC110794.1-201ENST00000505816 425 ntBASIC3.64□□□□□ -1.83
VTNP04004 AC079395.1-201ENST00000510981 262 ntBASIC3.64□□□□□ -1.83
VTNP04004 PTGES3P3-201ENST00000511479 482 ntBASIC3.64□□□□□ -1.83
VTNP04004 AC023141.12-201ENST00000512399 199 ntBASIC3.64□□□□□ -1.83
VTNP04004 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.64□□□□□ -1.83
VTNP04004 HIGD1AP3-201ENST00000515857 278 ntBASIC3.64□□□□□ -1.83
VTNP04004 RN7SKP31-201ENST00000516354 278 ntBASIC3.64□□□□□ -1.83
VTNP04004 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.64□□□□□ -1.83
VTNP04004 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VTNP04004 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VTNP04004 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.64□□□□□ -1.83
VTNP04004 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 AC092851.1-201ENST00000535964 478 ntBASIC3.64□□□□□ -1.83
VTNP04004 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.64□□□□□ -1.83
VTNP04004 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 AC090502.2-201ENST00000549267 280 ntBASIC3.64□□□□□ -1.83
VTNP04004 HIGD1AP1-201ENST00000550979 275 ntBASIC3.64□□□□□ -1.83
VTNP04004 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 DUXAP1-201ENST00000556632 463 ntBASIC3.64□□□□□ -1.83
VTNP04004 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.64□□□□□ -1.83
VTNP04004 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 AC011471.1-201ENST00000585766 187 ntBASIC3.64□□□□□ -1.83
VTNP04004 DPRXP5-201ENST00000604662 539 ntBASIC3.64□□□□□ -1.83
VTNP04004 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VTNP04004 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.64□□□□□ -1.83
VTNP04004 AL356321.1-201ENST00000621360 228 ntBASIC3.64□□□□□ -1.83
VTNP04004 AP003485.2-201ENST00000623636 610 ntBASIC3.64□□□□□ -1.83
VTNP04004 AC026422.1-201ENST00000623961 452 ntBASIC3.64□□□□□ -1.83
VTNP04004 MIR4278-201ENST00000636094 69 ntBASIC3.64□□□□□ -1.83
VTNP04004 MKKS-204ENST00000639674 192 ntBASIC3.64□□□□□ -1.83
VTNP04004 HSPA8P1-201ENST00000425843 1833 ntBASIC3.64□□□□□ -1.83
VTNP04004 AC005539.1-201ENST00000443768 1479 ntBASIC3.64□□□□□ -1.83
VTNP04004 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VTNP04004 AP000776.1-201ENST00000530032 1663 ntBASIC3.64□□□□□ -1.83
VTNP04004 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.64□□□□□ -1.83
VTNP04004 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VTNP04004 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VTNP04004 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
VTNP04004 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
VTNP04004 AL133412.1-201ENST00000380194 2992 ntBASIC3.63□□□□□ -1.83
VTNP04004 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
VTNP04004 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
VTNP04004 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VTNP04004 Y_RNA.25-201ENST00000362528 102 ntBASIC3.63□□□□□ -1.83
VTNP04004 RN7SKP44-201ENST00000363602 316 ntBASIC3.63□□□□□ -1.83
VTNP04004 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.63□□□□□ -1.83
VTNP04004 SUGT1P1-201ENST00000379514 476 ntBASIC3.63□□□□□ -1.83
VTNP04004 RNU6-157P-201ENST00000383957 107 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC119751.3-201ENST00000399720 670 ntBASIC3.63□□□□□ -1.83
VTNP04004 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VTNP04004 RNU2-28P-201ENST00000410457 189 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VTNP04004 RPS3AP9-201ENST00000417027 792 ntBASIC3.63□□□□□ -1.83
VTNP04004 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.63□□□□□ -1.83
VTNP04004 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.63□□□□□ -1.83
VTNP04004 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.63□□□□□ -1.83
VTNP04004 MTND1P32-201ENST00000433043 938 ntBASIC3.63□□□□□ -1.83
VTNP04004 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VTNP04004 AC241584.1-201ENST00000438469 1241 ntBASIC3.63□□□□□ -1.83
VTNP04004 ATP5C1P1-201ENST00000441945 895 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.63□□□□□ -1.83
VTNP04004 ATG12P2-201ENST00000456830 416 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.63□□□□□ -1.83
VTNP04004 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.63□□□□□ -1.83
VTNP04004 AC010587.2-201ENST00000511727 448 ntBASIC3.63□□□□□ -1.83
VTNP04004 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.63□□□□□ -1.83
VTNP04004 RNU6-1261P-201ENST00000517194 104 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.63□□□□□ -1.83
VTNP04004 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VTNP04004 MRPS36P5-201ENST00000551909 298 ntBASIC3.63□□□□□ -1.83
VTNP04004 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.63□□□□□ -1.83
VTNP04004 AC087465.1-201ENST00000560574 245 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.63□□□□□ -1.83
VTNP04004 MIR5004-201ENST00000579078 107 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC015917.1-201ENST00000579654 510 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.63□□□□□ -1.83
VTNP04004 AC009220.3-201ENST00000604318 586 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC073657.2-201ENST00000605661 303 ntBASIC3.63□□□□□ -1.83
VTNP04004 AL513477.2-201ENST00000607858 568 ntBASIC3.63□□□□□ -1.83
VTNP04004 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.63□□□□□ -1.83
VTNP04004 AC131159.1-201ENST00000621854 213 ntBASIC3.63□□□□□ -1.83
VTNP04004 AC026634.1-201ENST00000634369 198 ntBASIC3.63□□□□□ -1.83
VTNP04004 CU459211.1-201ENST00000635667 749 ntBASIC3.63□□□□□ -1.83
VTNP04004 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.63□□□□□ -1.83
VTNP04004 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms