Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.55□□□□□ -2
COL4A1P02462 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.55□□□□□ -2
COL4A1P02462 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL4A1P02462 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.55□□□□□ -2
COL4A1P02462 MTND4LP12-201ENST00000448237 295 ntBASIC2.55□□□□□ -2
COL4A1P02462 AL645939.1-201ENST00000453429 797 ntBASIC2.55□□□□□ -2
COL4A1P02462 RPS29P11-201ENST00000496507 171 ntBASIC2.55□□□□□ -2
COL4A1P02462 RPL38P4-201ENST00000502376 214 ntBASIC2.55□□□□□ -2
COL4A1P02462 RN7SKP5-201ENST00000517045 272 ntBASIC2.55□□□□□ -2
COL4A1P02462 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.55□□□□□ -2
COL4A1P02462 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.55□□□□□ -2
COL4A1P02462 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.55□□□□□ -2
COL4A1P02462 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.55□□□□□ -2
COL4A1P02462 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.55□□□□□ -2
COL4A1P02462 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.55□□□□□ -2
COL4A1P02462 AC006254.3-201ENST00000603353 884 ntBASIC2.55□□□□□ -2
COL4A1P02462 VN1R7P-201ENST00000619242 903 ntBASIC2.55□□□□□ -2
COL4A1P02462 AC092184.1-201ENST00000625042 715 ntBASIC2.55□□□□□ -2
COL4A1P02462 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL4A1P02462 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
COL4A1P02462 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
COL4A1P02462 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL4A1P02462 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.55□□□□□ -2
COL4A1P02462 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
COL4A1P02462 AC013268.2-201ENST00000420753 337 ntBASIC2.54□□□□□ -2
COL4A1P02462 AL121882.1-201ENST00000422893 417 ntBASIC2.54□□□□□ -2
COL4A1P02462 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.54□□□□□ -2
COL4A1P02462 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.54□□□□□ -2
COL4A1P02462 MTCO3P17-201ENST00000443775 513 ntBASIC2.54□□□□□ -2
COL4A1P02462 NDUFS5P3-201ENST00000450668 321 ntBASIC2.54□□□□□ -2
COL4A1P02462 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.54□□□□□ -2
COL4A1P02462 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
COL4A1P02462 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL4A1P02462 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.54□□□□□ -2
COL4A1P02462 LRRC37A5P-203ENST00000580181 585 ntBASIC2.54□□□□□ -2
COL4A1P02462 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL4A1P02462 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.54□□□□□ -2
COL4A1P02462 AC013562.2-201ENST00000611632 603 ntBASIC2.54□□□□□ -2
COL4A1P02462 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.54□□□□□ -2
COL4A1P02462 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL4A1P02462 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.54□□□□□ -2
COL4A1P02462 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL4A1P02462 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL4A1P02462 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL4A1P02462 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL4A1P02462 AL589994.1-201ENST00000404962 340 ntBASIC2.53□□□□□ -2
COL4A1P02462 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.53□□□□□ -2
COL4A1P02462 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.53□□□□□ -2
COL4A1P02462 SEC63P1-201ENST00000425785 1258 ntBASIC2.53□□□□□ -2
COL4A1P02462 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.53□□□□□ -2
COL4A1P02462 RPL23AP62-201ENST00000463396 453 ntBASIC2.53□□□□□ -2
COL4A1P02462 AC072039.1-201ENST00000477611 581 ntBASIC2.53□□□□□ -2
COL4A1P02462 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.53□□□□□ -2
COL4A1P02462 AP000889.2-201ENST00000532684 490 ntBASIC2.53□□□□□ -2
COL4A1P02462 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.53□□□□□ -2
COL4A1P02462 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.53□□□□□ -2
COL4A1P02462 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.53□□□□□ -2
COL4A1P02462 AP000942.3-201ENST00000603702 160 ntBASIC2.53□□□□□ -2
COL4A1P02462 AC073387.2-201ENST00000604797 784 ntBASIC2.53□□□□□ -2
COL4A1P02462 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.53□□□□□ -2
COL4A1P02462 Y_RNA.783-201ENST00000613546 102 ntBASIC2.53□□□□□ -2
COL4A1P02462 AL512643.1-201ENST00000635735 524 ntBASIC2.53□□□□□ -2
COL4A1P02462 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A1P02462 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.53□□□□□ -2
COL4A1P02462 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A1P02462 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A1P02462 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A1P02462 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
COL4A1P02462 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.53□□□□□ -2
COL4A1P02462 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
COL4A1P02462 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.53□□□□□ -2
COL4A1P02462 Y_RNA.164-201ENST00000363709 102 ntBASIC2.53□□□□□ -2
COL4A1P02462 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
COL4A1P02462 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A1P02462 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.53□□□□□ -2
COL4A1P02462 RNA5SP385-201ENST00000515947 110 ntBASIC2.53□□□□□ -2
COL4A1P02462 EIF4EP5-201ENST00000528228 640 ntBASIC2.53□□□□□ -2
COL4A1P02462 AC010198.2-201ENST00000550612 259 ntBASIC2.53□□□□□ -2
COL4A1P02462 AC110588.1-201ENST00000559699 137 ntBASIC2.53□□□□□ -2
COL4A1P02462 AL022099.1-201ENST00000604551 712 ntBASIC2.53□□□□□ -2
COL4A1P02462 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
COL4A1P02462 RPL23AP61-201ENST00000623642 466 ntBASIC2.53□□□□□ -2
COL4A1P02462 AC123912.3-201ENST00000600907 1367 ntBASIC2.53□□□□□ -2
COL4A1P02462 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
COL4A1P02462 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.52□□□□□ -2.01
COL4A1P02462 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL4A1P02462 AC244517.1-201ENST00000606030 2086 ntBASIC2.52□□□□□ -2.01
COL4A1P02462 AL359893.1-201ENST00000447628 1580 ntBASIC2.52□□□□□ -2.01
COL4A1P02462 Y_RNA.118-201ENST00000363300 101 ntBASIC2.52□□□□□ -2.01
COL4A1P02462 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.52□□□□□ -2.01
COL4A1P02462 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.52□□□□□ -2.01
COL4A1P02462 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.52□□□□□ -2.01
COL4A1P02462 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.52□□□□□ -2.01
COL4A1P02462 RNU6-295P-201ENST00000516901 104 ntBASIC2.52□□□□□ -2.01
COL4A1P02462 HSPE1P18-201ENST00000517602 280 ntBASIC2.52□□□□□ -2.01
COL4A1P02462 NF1P5-201ENST00000588287 448 ntBASIC2.52□□□□□ -2.01
COL4A1P02462 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.52□□□□□ -2.01
COL4A1P02462 AC000123.2-201ENST00000623124 461 ntBASIC2.52□□□□□ -2.01
COL4A1P02462 AC010297.1-201ENST00000623948 149 ntBASIC2.52□□□□□ -2.01
COL4A1P02462 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms