Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RAB11AP1-201ENST00000442978 646 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.6□□□□□ -1.67
COL3A1P02461 AL034418.1-201ENST00000448675 860 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 TMED11P-201ENST00000479478 690 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 AC025465.4-201ENST00000513422 638 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 SNORA70.24-201ENST00000517233 118 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.6□□□□□ -1.67
COL3A1P02461 IGKV2-26-201ENST00000518305 343 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.6□□□□□ -1.67
COL3A1P02461 SMARCE1P4-201ENST00000523647 241 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 DEFB108A-201ENST00000530110 222 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 AC104383.1-201ENST00000530297 370 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.6□□□□□ -1.67
COL3A1P02461 MIR3912-201ENST00000577566 105 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 MIR5708-201ENST00000579723 85 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 AC018714.1-201ENST00000605028 208 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 AC092354.1-201ENST00000606057 376 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 AC012360.2-201ENST00000609349 391 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 AC112204.3-201ENST00000623822 332 ntBASIC4.6□□□□□ -1.67
COL3A1P02461 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.6□□□□□ -1.67
COL3A1P02461 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.6□□□□□ -1.67
COL3A1P02461 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL3A1P02461 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL3A1P02461 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
COL3A1P02461 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
COL3A1P02461 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.6□□□□□ -1.67
COL3A1P02461 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL3A1P02461 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
COL3A1P02461 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.59□□□□□ -1.67
COL3A1P02461 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
COL3A1P02461 AL354685.2-201ENST00000448218 1447 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL3A1P02461 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.59□□□□□ -1.67
COL3A1P02461 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 AL391417.1-201ENST00000404100 426 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 AL590609.2-201ENST00000421430 368 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 LARP1BP3-201ENST00000437229 869 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.59□□□□□ -1.67
COL3A1P02461 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.59□□□□□ -1.67
COL3A1P02461 AC115115.1-201ENST00000449927 248 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.59□□□□□ -1.67
COL3A1P02461 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.59□□□□□ -1.67
COL3A1P02461 MTCO2P30-201ENST00000503662 364 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.59□□□□□ -1.67
COL3A1P02461 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.59□□□□□ -1.67
COL3A1P02461 AC074250.1-201ENST00000511117 192 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.59□□□□□ -1.67
COL3A1P02461 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.59□□□□□ -1.67
COL3A1P02461 PRELID3BP4-201ENST00000515476 571 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.59□□□□□ -1.67
COL3A1P02461 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.59□□□□□ -1.67
COL3A1P02461 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.59□□□□□ -1.67
COL3A1P02461 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.59□□□□□ -1.67
COL3A1P02461 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.59□□□□□ -1.67
COL3A1P02461 AL022154.1-201ENST00000604698 785 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 AL121757.2-201ENST00000611223 313 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 AC091304.9-201ENST00000612091 226 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 AC073569.3-201ENST00000619055 682 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 AL359697.1-201ENST00000624879 587 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 AC116618.1-201ENST00000634617 774 ntBASIC4.59□□□□□ -1.67
COL3A1P02461 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.59□□□□□ -1.67
COL3A1P02461 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL3A1P02461 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COL3A1P02461 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
COL3A1P02461 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.59□□□□□ -1.68
COL3A1P02461 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
COL3A1P02461 MTCO1P18-201ENST00000455518 1419 ntBASIC4.59□□□□□ -1.68
COL3A1P02461 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.59□□□□□ -1.68
COL3A1P02461 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
COL3A1P02461 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL3A1P02461 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL3A1P02461 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL3A1P02461 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.58□□□□□ -1.68
COL3A1P02461 OTUD4P1-201ENST00000237841 3067 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.58□□□□□ -1.68
COL3A1P02461 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
COL3A1P02461 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL3A1P02461 AL353743.4-201ENST00000422653 1547 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL3A1P02461 RNU6-181P-201ENST00000363225 107 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 MIR181A1-201ENST00000385026 110 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 CBX1P3-201ENST00000413296 527 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 USP9YP6-201ENST00000413550 854 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 TAF13P2-201ENST00000416876 286 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 MTATP6P27-201ENST00000416987 621 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 USP9YP20-201ENST00000419224 558 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.58□□□□□ -1.68
COL3A1P02461 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.58□□□□□ -1.68
COL3A1P02461 PAXBP1P1-201ENST00000449315 447 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 USP9YP34-201ENST00000453983 808 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.58□□□□□ -1.68
COL3A1P02461 PCBP2P3-201ENST00000509726 843 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms