Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL2A1P02458 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.64□□□□□ -1.83
COL2A1P02458 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL2A1P02458 ZNF542P-204ENST00000482727 1305 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.64□□□□□ -1.83
COL2A1P02458 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
COL2A1P02458 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL2A1P02458 AC062016.1-201ENST00000355719 319 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 RNU6-1331P-201ENST00000363658 106 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.64□□□□□ -1.83
COL2A1P02458 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.64□□□□□ -1.83
COL2A1P02458 RNU6-517P-201ENST00000384362 110 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 RNU6-83P-201ENST00000384568 112 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 Y_RNA.559-201ENST00000384686 107 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AL136310.1-201ENST00000404926 654 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 RNA5SP293-201ENST00000410527 113 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC092638.1-201ENST00000411966 1275 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.64□□□□□ -1.83
COL2A1P02458 AL158825.1-201ENST00000414735 521 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 RAD23BP2-201ENST00000416003 1207 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 ZYG11AP1-201ENST00000430329 837 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.64□□□□□ -1.83
COL2A1P02458 AC084290.1-201ENST00000434995 374 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC108734.1-201ENST00000439549 399 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC000041.1-201ENST00000439655 175 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC245517.2-201ENST00000442890 346 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 MTND5P2-201ENST00000442927 1142 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.64□□□□□ -1.83
COL2A1P02458 AC027673.1-201ENST00000456245 405 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 SRRM1P2-201ENST00000464531 1192 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.64□□□□□ -1.83
COL2A1P02458 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.64□□□□□ -1.83
COL2A1P02458 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.64□□□□□ -1.83
COL2A1P02458 GTF3AP2-201ENST00000557014 266 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AL354943.1-201ENST00000572103 781 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.64□□□□□ -1.83
COL2A1P02458 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.64□□□□□ -1.83
COL2A1P02458 AC012254.4-201ENST00000588843 273 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.64□□□□□ -1.83
COL2A1P02458 AC025588.4-201ENST00000615802 908 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC007490.1-201ENST00000624321 703 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AL160394.1-201ENST00000624765 724 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.64□□□□□ -1.83
COL2A1P02458 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL2A1P02458 AC007496.3-201ENST00000624987 3443 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
COL2A1P02458 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL2A1P02458 AC017002.4-201ENST00000604721 1525 ntBASIC3.64□□□□□ -1.83
COL2A1P02458 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.64□□□□□ -1.83
COL2A1P02458 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.63□□□□□ -1.83
COL2A1P02458 RNU6-224P-201ENST00000384055 107 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 Y_RNA.578-201ENST00000390903 88 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 AC008173.1-201ENST00000418901 264 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.63□□□□□ -1.83
COL2A1P02458 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.63□□□□□ -1.83
COL2A1P02458 RPS26P40-201ENST00000435209 294 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.63□□□□□ -1.83
COL2A1P02458 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.63□□□□□ -1.83
COL2A1P02458 FTH1P1-201ENST00000437933 532 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.63□□□□□ -1.83
COL2A1P02458 AC009961.3-201ENST00000449832 765 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.63□□□□□ -1.83
COL2A1P02458 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.63□□□□□ -1.83
COL2A1P02458 AC091544.1-201ENST00000484702 348 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 AC079203.1-201ENST00000487972 404 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 OR5H4P-201ENST00000510851 923 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 AC008549.1-201ENST00000512900 643 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.63□□□□□ -1.83
COL2A1P02458 RNU1-41P-201ENST00000516161 162 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 RNU1-48P-201ENST00000516400 162 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL2A1P02458 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.63□□□□□ -1.83
COL2A1P02458 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL2A1P02458 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.63□□□□□ -1.83
COL2A1P02458 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.63□□□□□ -1.83
COL2A1P02458 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.63□□□□□ -1.83
COL2A1P02458 AC104229.1-201ENST00000561364 255 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.63□□□□□ -1.83
COL2A1P02458 MIR4769-201ENST00000584126 77 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 AP003973.1-201ENST00000604639 691 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 RBM11P1-201ENST00000604951 799 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 AL357078.3-201ENST00000607528 618 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.63□□□□□ -1.83
COL2A1P02458 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL2A1P02458 AL603839.4-201ENST00000624658 1005 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.63□□□□□ -1.83
COL2A1P02458 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
COL2A1P02458 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.63□□□□□ -1.83
COL2A1P02458 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL2A1P02458 AL390237.1-201ENST00000404226 1415 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 AC000403.1-201ENST00000613696 3585 ntBASIC3.63□□□□□ -1.83
COL2A1P02458 AL672296.1-201ENST00000427780 2158 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
COL2A1P02458 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 OR5J1P-201ENST00000313544 939 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 MIR22-201ENST00000362190 85 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 RNU6-867P-201ENST00000364956 107 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 SNORD116.1-201ENST00000365628 92 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 Y_RNA.560-201ENST00000384689 102 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms