Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC092634.6-201ENST00000418558 192 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 AC106883.1-201ENST00000418805 562 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 NANOGP5-201ENST00000424456 877 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 Z93242.1-201ENST00000427102 353 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 OR10R1P-201ENST00000441524 1141 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PDGFBP01127 HMGB1P16-201ENST00000447155 540 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 MTND2P19-201ENST00000449129 1012 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 AC092155.2-201ENST00000454675 477 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.54□□□□□ -1.84
PDGFBP01127 snoU109.4-201ENST00000458953 143 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 AC069528.1-202ENST00000482888 637 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFBP01127 AC021678.1-201ENST00000505195 936 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFBP01127 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.54□□□□□ -1.84
PDGFBP01127 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.54□□□□□ -1.84
PDGFBP01127 DEFB130C-202ENST00000530001 230 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.54□□□□□ -1.84
PDGFBP01127 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.54□□□□□ -1.84
PDGFBP01127 MIR4276-201ENST00000584832 70 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 AP003392.5-201ENST00000607857 415 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 AC008083.4-201ENST00000615076 444 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 AC087821.2-201ENST00000637086 450 ntBASIC3.54□□□□□ -1.84
PDGFBP01127 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.54□□□□□ -1.84
PDGFBP01127 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.54□□□□□ -1.84
PDGFBP01127 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFBP01127 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFBP01127 AC007656.2-201ENST00000624902 4547 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AC138915.3-201ENST00000562908 1389 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
PDGFBP01127 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFBP01127 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
PDGFBP01127 FTLP6-201ENST00000355274 422 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 RNU6-492P-201ENST00000363035 104 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFBP01127 OOSP1P1-201ENST00000423265 274 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFBP01127 AC092648.1-201ENST00000425870 423 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 DPRXP1-201ENST00000426312 460 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFBP01127 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFBP01127 AC093155.1-201ENST00000440164 826 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.53□□□□□ -1.84
PDGFBP01127 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.53□□□□□ -1.84
PDGFBP01127 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.53□□□□□ -1.84
PDGFBP01127 RPS26P15-201ENST00000488067 348 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFBP01127 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFBP01127 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFBP01127 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.53□□□□□ -1.84
PDGFBP01127 MIR2114-201ENST00000516645 80 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 SNORA48.10-201ENST00000516965 160 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.53□□□□□ -1.84
PDGFBP01127 AL121766.1-201ENST00000547436 487 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 EEF1B2P4-201ENST00000551398 348 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFBP01127 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFBP01127 AC015688.2-201ENST00000584523 262 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AP001029.3-201ENST00000588063 596 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.53□□□□□ -1.84
PDGFBP01127 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.53□□□□□ -1.84
PDGFBP01127 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFBP01127 XIAPP1-201ENST00000603162 600 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AC055876.5-201ENST00000605667 259 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AC024060.1-201ENST00000607052 494 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.53□□□□□ -1.84
PDGFBP01127 AL049780.3-201ENST00000624612 1583 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFBP01127 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.53□□□□□ -1.84
PDGFBP01127 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.85
PDGFBP01127 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.52□□□□□ -1.85
PDGFBP01127 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.52□□□□□ -1.85
PDGFBP01127 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFBP01127 SUGT1P1-201ENST00000379514 476 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 MTHFD2P2-201ENST00000407725 247 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 RNU6-712P-201ENST00000410558 100 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFBP01127 HMGB3P20-201ENST00000417997 600 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFBP01127 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFBP01127 SEPT7P5-201ENST00000434048 306 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AL590103.1-201ENST00000434488 307 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 NDUFB1P1-201ENST00000435191 180 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 HMGN2P20-201ENST00000437531 273 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AC107083.1-201ENST00000439643 279 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AL358794.1-201ENST00000445689 381 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.52□□□□□ -1.85
PDGFBP01127 AL031313.1-201ENST00000448435 256 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 PTGES3P5-201ENST00000455109 434 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AC005410.1-202ENST00000460347 485 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 AC004924.1-201ENST00000480160 781 ntBASIC3.52□□□□□ -1.85
PDGFBP01127 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms