Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 Y_RNA.493-201ENST00000384422 102 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 MIR708-201ENST00000390708 88 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 SNORA40.3-201ENST00000390964 122 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.69□□□□□ -1.82
ZIC3O60481 MTCO1P21-201ENST00000416634 589 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 MTCYBP24-201ENST00000420387 1106 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 BX890604.2-201ENST00000427883 474 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AL117339.2-201ENST00000430475 180 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 PGBD4P3-201ENST00000440731 581 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.69□□□□□ -1.82
ZIC3O60481 AL033528.1-201ENST00000453780 140 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 MTCYBP1-201ENST00000454315 1119 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 Z82190.1-201ENST00000454534 490 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 RPS4XP10-201ENST00000465034 731 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 RN7SL585P-201ENST00000470538 280 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AL132838.2-201ENST00000492041 314 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 AC112204.1-201ENST00000502591 103 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.69□□□□□ -1.82
ZIC3O60481 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.69□□□□□ -1.82
ZIC3O60481 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.69□□□□□ -1.82
ZIC3O60481 OR5M7P-201ENST00000526140 972 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AP002453.2-201ENST00000533503 320 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.69□□□□□ -1.82
ZIC3O60481 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.69□□□□□ -1.82
ZIC3O60481 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.69□□□□□ -1.82
ZIC3O60481 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.69□□□□□ -1.82
ZIC3O60481 MIR5684-201ENST00000585074 65 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 BNIP3P8-201ENST00000597863 560 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 NDUFA8P1-201ENST00000605525 367 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AL031666.3-201ENST00000609320 1006 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AC006329.2-201ENST00000611491 394 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AC087241.4-201ENST00000612441 480 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AL589743.7-201ENST00000612637 233 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 SNX18P1Y-201ENST00000616231 511 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.69□□□□□ -1.82
ZIC3O60481 AC040168.1-201ENST00000623594 991 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ZIC3O60481 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.68□□□□□ -1.82
ZIC3O60481 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
ZIC3O60481 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 SNORA60-201ENST00000362396 134 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 RNA5SP479-201ENST00000364858 117 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 RNA5SP283-201ENST00000365604 119 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 RPS20P2-201ENST00000402520 389 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AL356421.1-201ENST00000403255 413 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 MIR1250-201ENST00000408098 113 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 RNU2-66P-201ENST00000410650 161 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 USP9YP13-201ENST00000417797 480 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 OR5BE1P-201ENST00000425977 939 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 RWDD4P2-201ENST00000426392 563 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC010975.2-201ENST00000427781 588 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.68□□□□□ -1.82
ZIC3O60481 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.68□□□□□ -1.82
ZIC3O60481 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.68□□□□□ -1.82
ZIC3O60481 SKP1P1-201ENST00000438081 489 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.68□□□□□ -1.82
ZIC3O60481 RPS4XP4-201ENST00000443195 763 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 MTND1P27-201ENST00000451117 902 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AL353691.1-201ENST00000451332 387 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.68□□□□□ -1.82
ZIC3O60481 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.68□□□□□ -1.82
ZIC3O60481 AC146507.1-201ENST00000468335 354 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC006517.1-201ENST00000480485 328 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.68□□□□□ -1.82
ZIC3O60481 COX7A2P2-201ENST00000505291 250 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 MTND2P33-201ENST00000506452 1031 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC109464.2-201ENST00000510242 943 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 CDC42P4-201ENST00000510507 563 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC006499.6-201ENST00000511169 607 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.68□□□□□ -1.82
ZIC3O60481 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.68□□□□□ -1.82
ZIC3O60481 OR8R1P-201ENST00000543943 764 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.68□□□□□ -1.82
ZIC3O60481 ZNF519P3-201ENST00000557158 1032 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.68□□□□□ -1.82
ZIC3O60481 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.68□□□□□ -1.82
ZIC3O60481 AC007599.1-201ENST00000568688 1174 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 EIF1P4-201ENST00000572664 335 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms