Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN3O15551 AC026634.1-201ENST00000634369 198 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 ZNF663P-202ENST00000641770 1131 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN3O15551 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN3O15551 AC092326.2-201ENST00000624772 1561 ntBASIC3.46□□□□□ -1.86
CLDN3O15551 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN3O15551 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN3O15551 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CLDN3O15551 RNU6-492P-201ENST00000363035 104 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 RNU6-1066P-201ENST00000363573 105 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN3O15551 SNORA9-201ENST00000384215 133 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 SNORA7.4-201ENST00000384249 137 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 MIR217-201ENST00000384817 110 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 EI24P2-201ENST00000397776 1076 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 RNU2-28P-201ENST00000410457 189 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC007899.1-201ENST00000412776 775 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 BTF3P8-201ENST00000414577 526 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC092634.6-201ENST00000418558 192 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN3O15551 HMGN2P20-201ENST00000437531 273 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN3O15551 COX6CP18-201ENST00000448769 222 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 MRPL42P4-201ENST00000453267 443 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC244505.3-201ENST00000454598 187 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC012181.1-201ENST00000479895 423 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC013828.1-201ENST00000481845 158 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC092902.1-201ENST00000486999 259 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC021146.5-201ENST00000503544 545 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN3O15551 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN3O15551 RNU1-61P-201ENST00000516107 151 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 SNORA48.10-201ENST00000516965 160 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC090502.2-201ENST00000549267 280 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC010198.2-201ENST00000550612 259 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 MTCYBP27-201ENST00000555160 670 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC122134.1-202ENST00000569111 1201 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN3O15551 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN3O15551 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.45□□□□□ -1.86
CLDN3O15551 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN3O15551 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN3O15551 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN3O15551 AL136164.4-201ENST00000625013 2135 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN3O15551 AC118273.1-201ENST00000525324 3006 ntBASIC3.45□□□□□ -1.86
CLDN3O15551 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN3O15551 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN3O15551 GDI2P1-201ENST00000429312 1336 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN3O15551 SRP72P2-201ENST00000344851 1979 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN3O15551 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN3O15551 RNU6-805P-201ENST00000365643 106 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 RNU6-657P-201ENST00000383904 107 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 RNU6-1074P-201ENST00000383995 104 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC016769.3-201ENST00000396562 315 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN3O15551 AC092447.6-201ENST00000414578 210 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC027644.1-201ENST00000419595 298 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 YPEL5P1-201ENST00000419731 367 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN3O15551 Z93242.1-201ENST00000427102 353 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC125238.1-201ENST00000448842 249 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN3O15551 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN3O15551 AC093801.2-201ENST00000503966 1050 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 BOLA3P3-201ENST00000505182 232 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 MLLT10P2-201ENST00000506434 249 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN3O15551 RNU6-27P-201ENST00000516146 107 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN3O15551 AC092451.2-201ENST00000538746 658 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AL389895.1-201ENST00000554127 252 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.44□□□□□ -1.86
CLDN3O15551 AC037471.2-201ENST00000564941 598 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC023825.1-201ENST00000566704 1030 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN3O15551 AP001029.3-201ENST00000588063 596 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC022146.1-201ENST00000595307 847 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC055876.5-201ENST00000605667 259 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC099785.1-201ENST00000605697 437 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AL583856.2-201ENST00000606298 543 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AC099506.2-201ENST00000623074 221 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN3O15551 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
CLDN3O15551 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN3O15551 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN3O15551 OR5BR1P-201ENST00000524992 1330 ntBASIC3.44□□□□□ -1.86
CLDN3O15551 AL049780.3-201ENST00000624612 1583 ntBASIC3.43□□□□□ -1.86
CLDN3O15551 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.43□□□□□ -1.86
CLDN3O15551 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.43□□□□□ -1.86
CLDN3O15551 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLDN3O15551 RNA5SP383-201ENST00000362934 120 ntBASIC3.43□□□□□ -1.86
CLDN3O15551 RNA5SP374-201ENST00000362939 125 ntBASIC3.43□□□□□ -1.86
CLDN3O15551 SNORD15B-201ENST00000384714 146 ntBASIC3.43□□□□□ -1.86
CLDN3O15551 U3.29-201ENST00000391296 212 ntBASIC3.43□□□□□ -1.86
CLDN3O15551 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms