Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SFR1P2-201ENST00000421841 730 ntBASIC3.05□□□□□ -1.92
LSM1O15116 USP9YP36-201ENST00000424581 829 ntBASIC3.05□□□□□ -1.92
LSM1O15116 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.05□□□□□ -1.92
LSM1O15116 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM1O15116 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM1O15116 GXYLT1P1-201ENST00000446657 490 ntBASIC3.05□□□□□ -1.92
LSM1O15116 ELOCP23-201ENST00000452014 332 ntBASIC3.05□□□□□ -1.92
LSM1O15116 GSTA11P-201ENST00000452866 669 ntBASIC3.05□□□□□ -1.92
LSM1O15116 RPS20P24-201ENST00000457473 361 ntBASIC3.05□□□□□ -1.92
LSM1O15116 AC078857.1-201ENST00000469870 667 ntBASIC3.05□□□□□ -1.92
LSM1O15116 AC020898.1-201ENST00000474167 787 ntBASIC3.05□□□□□ -1.92
LSM1O15116 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM1O15116 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LSM1O15116 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LSM1O15116 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LSM1O15116 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LSM1O15116 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM1O15116 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM1O15116 OR8I1P-201ENST00000529291 931 ntBASIC3.05□□□□□ -1.92
LSM1O15116 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM1O15116 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.05□□□□□ -1.92
LSM1O15116 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM1O15116 MIR4666A-201ENST00000580160 79 ntBASIC3.05□□□□□ -1.92
LSM1O15116 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.05□□□□□ -1.92
LSM1O15116 DUXAP4-201ENST00000603046 613 ntBASIC3.05□□□□□ -1.92
LSM1O15116 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LSM1O15116 AL162574.2-201ENST00000614618 657 ntBASIC3.05□□□□□ -1.92
LSM1O15116 AC002076.2-201ENST00000617362 122 ntBASIC3.05□□□□□ -1.92
LSM1O15116 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LSM1O15116 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.05□□□□□ -1.92
LSM1O15116 AL590396.4-201ENST00000636779 956 ntBASIC3.05□□□□□ -1.92
LSM1O15116 FAM35BP-202ENST00000497389 3337 ntBASIC3.04□□□□□ -1.92
LSM1O15116 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
LSM1O15116 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LSM1O15116 RNA5SP50-201ENST00000363731 107 ntBASIC3.04□□□□□ -1.92
LSM1O15116 RNU1-33P-201ENST00000364249 162 ntBASIC3.04□□□□□ -1.92
LSM1O15116 RNU6-609P-201ENST00000365459 107 ntBASIC3.04□□□□□ -1.92
LSM1O15116 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LSM1O15116 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LSM1O15116 AP002784.2-201ENST00000397300 549 ntBASIC3.04□□□□□ -1.92
LSM1O15116 PTMAP2-201ENST00000397627 327 ntBASIC3.04□□□□□ -1.92
LSM1O15116 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.04□□□□□ -1.92
LSM1O15116 RNU6-575P-201ENST00000411326 105 ntBASIC3.04□□□□□ -1.92
LSM1O15116 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM1O15116 AC063979.1-201ENST00000415539 377 ntBASIC3.04□□□□□ -1.92
LSM1O15116 HMGN2P31-201ENST00000432430 273 ntBASIC3.04□□□□□ -1.92
LSM1O15116 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM1O15116 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.04□□□□□ -1.92
LSM1O15116 AL158053.1-201ENST00000441503 453 ntBASIC3.04□□□□□ -1.92
LSM1O15116 UQCRHP3-201ENST00000451503 251 ntBASIC3.04□□□□□ -1.92
LSM1O15116 AC008155.2-201ENST00000464337 397 ntBASIC3.04□□□□□ -1.92
LSM1O15116 AC109471.1-201ENST00000511631 612 ntBASIC3.04□□□□□ -1.92
LSM1O15116 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM1O15116 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.04□□□□□ -1.92
LSM1O15116 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.04□□□□□ -1.92
LSM1O15116 ERHP1-201ENST00000523006 310 ntBASIC3.04□□□□□ -1.92
LSM1O15116 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.04□□□□□ -1.92
LSM1O15116 SNRPGP16-201ENST00000533275 226 ntBASIC3.04□□□□□ -1.92
LSM1O15116 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LSM1O15116 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.04□□□□□ -1.92
LSM1O15116 AL391156.1-201ENST00000554965 554 ntBASIC3.04□□□□□ -1.92
LSM1O15116 AADACP1-206ENST00000561502 1193 ntBASIC3.04□□□□□ -1.92
LSM1O15116 SULT1C2P1-202ENST00000562418 459 ntBASIC3.04□□□□□ -1.92
LSM1O15116 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM1O15116 AC079148.1-201ENST00000565944 819 ntBASIC3.04□□□□□ -1.92
LSM1O15116 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.04□□□□□ -1.92
LSM1O15116 AC091046.2-201ENST00000620775 665 ntBASIC3.04□□□□□ -1.92
LSM1O15116 BX649567.1-201ENST00000642071 1134 ntBASIC3.04□□□□□ -1.92
LSM1O15116 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.04□□□□□ -1.92
LSM1O15116 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LSM1O15116 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LSM1O15116 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LSM1O15116 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.03□□□□□ -1.92
LSM1O15116 AC108206.1-201ENST00000570186 4159 ntBASIC3.03□□□□□ -1.92
LSM1O15116 AL355596.1-201ENST00000565399 3996 ntBASIC3.03□□□□□ -1.92
LSM1O15116 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LSM1O15116 RNU6-582P-201ENST00000362989 107 ntBASIC3.03□□□□□ -1.92
LSM1O15116 SNORD82-201ENST00000365530 70 ntBASIC3.03□□□□□ -1.92
LSM1O15116 SNORA51.6-201ENST00000384151 125 ntBASIC3.03□□□□□ -1.92
LSM1O15116 AC025750.1-201ENST00000399891 379 ntBASIC3.03□□□□□ -1.92
LSM1O15116 AC092447.6-201ENST00000414578 210 ntBASIC3.03□□□□□ -1.92
LSM1O15116 AC245054.2-201ENST00000415639 319 ntBASIC3.03□□□□□ -1.92
LSM1O15116 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.03□□□□□ -1.92
LSM1O15116 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.03□□□□□ -1.92
LSM1O15116 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.03□□□□□ -1.92
LSM1O15116 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.03□□□□□ -1.92
LSM1O15116 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LSM1O15116 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 AC005019.1-201ENST00000436455 431 ntBASIC3.03□□□□□ -1.92
LSM1O15116 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.03□□□□□ -1.92
LSM1O15116 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.03□□□□□ -1.92
LSM1O15116 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LSM1O15116 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.03□□□□□ -1.92
LSM1O15116 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.03□□□□□ -1.92
LSM1O15116 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms