Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 FO393419.3-201ENST00000428741 282 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AC073508.1-201ENST00000428866 656 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AC011816.1-201ENST00000441346 546 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.17□□□□□ -2.06
SDCBPO00560 AL035407.2-201ENST00000454090 378 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AL136126.1-201ENST00000473603 402 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.17□□□□□ -2.06
SDCBPO00560 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SDCBPO00560 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.17□□□□□ -2.06
SDCBPO00560 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.17□□□□□ -2.06
SDCBPO00560 SNORA31.13-201ENST00000516624 135 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.17□□□□□ -2.06
SDCBPO00560 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SDCBPO00560 AC079600.2-201ENST00000550076 130 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.17□□□□□ -2.06
SDCBPO00560 AC138761.3-201ENST00000579993 334 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.17□□□□□ -2.06
SDCBPO00560 AL161756.2-201ENST00000604597 246 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AC007619.2-201ENST00000605743 379 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.17□□□□□ -2.06
SDCBPO00560 AC242628.1-201ENST00000606810 391 ntBASIC2.17□□□□□ -2.06
SDCBPO00560 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.17□□□□□ -2.06
SDCBPO00560 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SDCBPO00560 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SDCBPO00560 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.17□□□□□ -2.06
SDCBPO00560 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SDCBPO00560 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SDCBPO00560 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SDCBPO00560 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.16□□□□□ -2.06
SDCBPO00560 AC016716.1-201ENST00000265882 708 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AL672167.1-206ENST00000356293 943 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 RNU1-100P-201ENST00000365255 165 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 RNU1-109P-201ENST00000383960 147 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SDCBPO00560 AL356057.3-201ENST00000402607 340 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SDCBPO00560 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 USP9YP36-201ENST00000424581 829 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.16□□□□□ -2.06
SDCBPO00560 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SDCBPO00560 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.16□□□□□ -2.06
SDCBPO00560 AC008280.2-201ENST00000455473 307 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 snoU13.22-201ENST00000459428 104 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
SDCBPO00560 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.16□□□□□ -2.06
SDCBPO00560 AC126182.1-201ENST00000478134 357 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 SETP6-201ENST00000479329 568 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AC093663.2-201ENST00000484625 313 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 MTCO1P31-201ENST00000506355 492 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.16□□□□□ -2.06
SDCBPO00560 SNORA31.15-201ENST00000516771 132 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 RNA5SP468-201ENST00000516782 93 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 SNORA31.20-201ENST00000517111 133 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 RNU6-889P-201ENST00000517189 103 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.16□□□□□ -2.06
SDCBPO00560 COX6CP8-201ENST00000522620 226 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AP003102.1-201ENST00000525638 661 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.16□□□□□ -2.06
SDCBPO00560 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.16□□□□□ -2.06
SDCBPO00560 MIR5092-201ENST00000583139 88 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 OR4G1P-201ENST00000588632 938 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AC091057.2-201ENST00000602594 792 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AL009028.1-201ENST00000604895 802 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.16□□□□□ -2.06
SDCBPO00560 AC006963.1-201ENST00000624003 1052 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 AC024023.1-201ENST00000624530 922 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 U6.107-201ENST00000637108 79 ntBASIC2.16□□□□□ -2.06
SDCBPO00560 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SDCBPO00560 AP000526.1-201ENST00000603308 1388 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SDCBPO00560 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
SDCBPO00560 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SDCBPO00560 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SDCBPO00560 RNU6-7-201ENST00000364784 107 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 RNU6-8-201ENST00000365467 107 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SDCBPO00560 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SDCBPO00560 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
SDCBPO00560 RNU6-1077P-201ENST00000410506 102 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 AL512504.1-201ENST00000415494 778 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 UBE2D3P2-201ENST00000424409 445 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 AC005189.1-201ENST00000431286 310 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.15□□□□□ -2.07
SDCBPO00560 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.15□□□□□ -2.07
SDCBPO00560 AC000041.1-201ENST00000439655 175 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SDCBPO00560 MRPL35P4-201ENST00000453682 566 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 AC104472.2-201ENST00000469035 601 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 RPL7L1P13-201ENST00000511702 739 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 HMGB1P46-201ENST00000520062 610 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms