Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 MTND5P27-201ENST00000428871 1720 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 RNU6-213P-201ENST00000384051 104 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 DHFRP6-201ENST00000401776 268 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 Z99755.1-201ENST00000414048 380 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 OR4K6P-201ENST00000416478 897 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 CCDC58P2-201ENST00000417131 366 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 DBIP2-201ENST00000419076 262 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC006960.1-201ENST00000419980 153 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 MTCO2P5-201ENST00000422621 426 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AL591419.1-201ENST00000427423 339 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AL353705.1-201ENST00000433468 480 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC092573.2-201ENST00000434546 243 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 THAP5P1-201ENST00000439089 262 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 SDCBPP1-201ENST00000440192 890 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 SNRPGP6-201ENST00000451124 220 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC010099.1-201ENST00000455434 375 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 FTH1P21-201ENST00000512179 511 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 RN7SKP282-201ENST00000516824 299 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 SLC2A13P1-201ENST00000531560 322 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AP000867.2-201ENST00000532468 320 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC087499.8-201ENST00000578406 226 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 ZNF415P1-201ENST00000582279 1166 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC067852.3-201ENST00000589177 561 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC093227.2-201ENST00000589357 285 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC013244.1-201ENST00000604279 193 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC112220.2-201ENST00000605513 533 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC024060.1-201ENST00000607052 494 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AL021707.7-201ENST00000607991 416 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC024257.5-201ENST00000612739 531 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC112484.5-201ENST00000624189 228 ntBASIC2.49□□□□□ -2.01
SMKR1H3BMG3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMKR1H3BMG3 AC032011.1-201ENST00000611703 1549 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 MIR30B-201ENST00000384850 88 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RNU6-298P-201ENST00000390888 96 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 HMGB1P17-201ENST00000403495 628 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RPS3AP24-201ENST00000407896 734 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 MIR1289-1-201ENST00000408836 144 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC007899.1-201ENST00000412776 775 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RPL23AP58-201ENST00000440453 469 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC008264.1-201ENST00000447612 367 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RPS29P12-201ENST00000460178 152 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC023598.1-201ENST00000472521 361 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC079203.1-201ENST00000487972 404 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RPL30P5-201ENST00000494923 336 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC017037.2-201ENST00000513850 890 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RNU1-143P-201ENST00000516296 146 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 SNORA70.18-201ENST00000516696 98 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RNU6-798P-201ENST00000516912 103 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC245166.1-201ENST00000521012 253 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms