Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 OFD1P18Y-201ENST00000420889 959 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AL049610.1-201ENST00000423374 372 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC005517.2-201ENST00000424673 553 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC002075.2-201ENST00000425207 252 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 CR769776.1-201ENST00000441254 787 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 RPL29P29-201ENST00000448725 423 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 RPL23AP67-201ENST00000465341 474 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC146507.1-201ENST00000468335 354 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 PHBP14-201ENST00000512887 367 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC005832.3-201ENST00000537929 631 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AL132657.2-201ENST00000564417 358 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 AC006065.5-201ENST00000623427 349 ntBASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD8-MDP1E9PL57 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 CR383658.2-201ENST00000547576 1525 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 SNORA51.6-201ENST00000384151 125 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 MIR128-1-201ENST00000384921 82 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 SNORA48.2-201ENST00000390926 124 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AL136116.1-201ENST00000403591 381 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC068533.2-201ENST00000411872 306 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AL133384.1-201ENST00000412744 351 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC126124.2-201ENST00000413542 321 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 PSMA2P3-201ENST00000429685 675 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC008264.1-201ENST00000447612 367 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 MTCO1P48-201ENST00000448024 1096 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 USP9YP25-201ENST00000457708 443 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 SNORD108-201ENST00000459332 71 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC010301.1-201ENST00000473936 355 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC013828.1-201ENST00000481845 158 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC012170.1-201ENST00000495139 359 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC023141.12-201ENST00000512399 199 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 ZNF705CP-201ENST00000530515 889 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 MTCO2P15-201ENST00000532655 656 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 LSM6P2-201ENST00000552208 177 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC090695.1-201ENST00000561269 1222 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC015917.1-201ENST00000579654 510 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC091057.2-201ENST00000602594 792 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC007687.1-201ENST00000602704 304 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 RNA5SP108-201ENST00000605921 117 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 RNVU1-4-201ENST00000612985 164 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC008121.2-201ENST00000614647 523 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC008993.2-201ENST00000631744 806 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AP001148.1-201ENST00000624124 2359 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 MTCO1P24-201ENST00000515438 1558 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AC107982.1-201ENST00000507171 1300 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 ZNF833P-201ENST00000424938 1494 ntBASIC3.41□□□□□ -1.86
NEDD8-MDP1E9PL57 AL353746.1-201ENST00000566293 6881 ntBASIC3.4□□□□□ -1.86
NEDD8-MDP1E9PL57 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NEDD8-MDP1E9PL57 ZNF826P-207ENST00000622273 1910 ntBASIC3.4□□□□□ -1.86
NEDD8-MDP1E9PL57 PABPC1P7-201ENST00000413177 1513 ntBASIC3.4□□□□□ -1.86
NEDD8-MDP1E9PL57 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NEDD8-MDP1E9PL57 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NEDD8-MDP1E9PL57 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 RNA5SP374-201ENST00000362939 125 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU6-216P-201ENST00000363282 104 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 Y_RNA.192-201ENST00000363977 102 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 MIR506-201ENST00000384998 124 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AL590084.1-201ENST00000407885 387 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AL023807.1-201ENST00000407932 359 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms