Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 AL606662.1-201ENST00000445763 553 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 MTCO1P27-201ENST00000448269 226 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AL500522.2-201ENST00000448562 343 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 RN7SL93P-201ENST00000463035 293 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC026979.1-201ENST00000492525 396 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 VN1R104P-201ENST00000505115 1009 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 POU5F1P7-201ENST00000508759 541 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 MTCYBP43-201ENST00000513621 740 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC022483.1-201ENST00000514020 567 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 SNORA31.8-201ENST00000516327 108 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC008802.1-201ENST00000519121 791 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 HMGN1P28-201ENST00000521340 364 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC007834.2-201ENST00000536310 343 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 OSBPL9P5-201ENST00000542581 171 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC090877.1-201ENST00000561418 344 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 FAM60BP-201ENST00000578364 658 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC112187.2-201ENST00000604345 283 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC106791.2-201ENST00000604680 391 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 RNU4-89P-201ENST00000607443 133 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AL391497.1-201ENST00000608671 547 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AL139418.1-201ENST00000613613 177 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 MIR6130-201ENST00000619419 109 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 MIR6758-201ENST00000620653 63 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC073530.2-201ENST00000623987 261 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC112484.5-201ENST00000624189 228 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 MIR6830-201ENST00000636015 70 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.13□□□□□ -1.91
SRRM4A7MD48 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC066616.2-201ENST00000559334 1481 ntBASIC3.13□□□□□ -1.91
SRRM4A7MD48 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SRRM4A7MD48 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SRRM4A7MD48 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRRM4A7MD48 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRRM4A7MD48 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRRM4A7MD48 NCAPGP1-201ENST00000505112 1814 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRRM4A7MD48 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC024560.2-201ENST00000507981 1497 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 RNY4P24-201ENST00000362735 96 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 HMGN2P8-201ENST00000391458 268 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AL138878.1-201ENST00000405131 347 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AMD1P2-201ENST00000412936 992 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 RPL21P32-201ENST00000419877 477 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 COX6CP17-201ENST00000421389 185 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 MTCO1P39-201ENST00000426148 480 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 MTCYBP45-201ENST00000435243 565 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 MTCYBP39-201ENST00000437562 491 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 H2AFZP6-201ENST00000444403 394 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 EEF1E1P1-201ENST00000446998 430 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 ATG12P2-201ENST00000456830 416 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 CEACAMP4-201ENST00000457676 421 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 RPS7P7-201ENST00000463499 571 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 RPL7P19-201ENST00000469948 618 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC017015.1-201ENST00000477387 286 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC021382.1-201ENST00000483523 359 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 RPS4XP15-201ENST00000489210 795 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC117522.2-201ENST00000510049 657 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC105914.1-201ENST00000511798 226 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC118465.1-201ENST00000513820 1271 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 RNU1-61P-201ENST00000516107 151 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 NARSP2-201ENST00000518524 679 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 SNRPGP16-201ENST00000533275 226 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 OR7K1P-201ENST00000546439 926 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 ZNF321P-202ENST00000550843 495 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AL391156.1-201ENST00000554965 554 ntBASIC3.12□□□□□ -1.91
SRRM4A7MD48 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.12□□□□□ -1.91
SRRM4A7MD48 AL591034.3-201ENST00000605511 685 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms