Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL354984.3-201ENST00000604803 325 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 OR10AB1P-201ENST00000609613 938 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC010149.2-201ENST00000637608 315 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 EIF2AP4-201ENST00000424793 1781 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 AC114546.3-201ENST00000623582 1734 ntBASIC5.06□□□□□ -1.6
PTPDC1A2A3K4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 Z95327.2-201ENST00000414579 1873 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 Y_RNA.256-201ENST00000364594 104 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 RNA5SP366-201ENST00000365454 123 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 Y_RNA.450-201ENST00000384198 113 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 SNORA70C-201ENST00000384538 135 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 MIR1193-201ENST00000408109 78 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 MIR1277-201ENST00000408536 78 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 RNU2-8P-201ENST00000410727 190 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 RPL30P3-201ENST00000424262 333 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AL353777.1-201ENST00000425552 326 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 NEK4P1-201ENST00000433383 879 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 RPL23AP52-201ENST00000439311 478 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC079448.1-201ENST00000449377 373 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AP1S2P1-201ENST00000457344 379 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AP001992.1-205ENST00000462248 379 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 RBM43P1-201ENST00000476891 1081 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC091167.1-201ENST00000492017 396 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 RN7SL812P-201ENST00000493791 279 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 PPBPP1-201ENST00000510807 373 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC093853.1-201ENST00000515689 483 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 RN7SKP21-201ENST00000516503 220 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 RN7SKP82-201ENST00000516786 223 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC022616.6-201ENST00000520479 119 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AP001893.2-201ENST00000526949 202 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 PHBP17-201ENST00000528576 541 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AP003181.2-201ENST00000528941 181 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC107918.3-201ENST00000533272 382 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AL590282.1-201ENST00000610379 1136 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC009159.1-201ENST00000618386 642 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AC015908.5-201ENST00000623289 343 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 MIR3688-2-201ENST00000636963 87 ntBASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.05□□□□□ -1.6
PTPDC1A2A3K4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 RNU1-108P-201ENST00000362556 161 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 RNU1-132P-201ENST00000364300 164 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 RNU6-1103P-201ENST00000384150 107 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 MRPL42P2-201ENST00000403169 426 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 RNU4-55P-201ENST00000410731 137 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 RPS23P10-201ENST00000416185 486 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 RPL36AP36-201ENST00000418616 301 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AL358176.3-201ENST00000420757 454 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC069157.1-201ENST00000421749 137 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 DPPA2P1-201ENST00000428060 556 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 RPS27AP12-201ENST00000429552 465 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AL359385.1-201ENST00000456509 365 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 RPL7P15-201ENST00000461190 712 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC022034.3-201ENST00000471393 478 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC041039.1-201ENST00000485656 536 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 FCF1P3-201ENST00000496394 590 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 TRAV8-5-201ENST00000537369 341 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC009101.1-201ENST00000568135 242 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC090615.1-201ENST00000577519 154 ntBASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.04□□□□□ -1.6
PTPDC1A2A3K4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms