Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MTCO1P24-201ENST00000515438 1558 ntBASIC3.21□□□□□ -1.9
SMIM28A0A1B0GU29 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 Y_RNA.111-201ENST00000363248 100 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 Y_RNA.578-201ENST00000390903 88 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 MTCO1P56-201ENST00000401674 224 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AL079342.2-201ENST00000403367 482 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 RPL7P8-201ENST00000411964 730 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 RAC1P8-201ENST00000427086 527 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 Z93242.1-201ENST00000427102 353 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 RPL23AP33-201ENST00000442301 452 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 MTCYBP42-201ENST00000444653 1130 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 EXTL2P1-201ENST00000446218 416 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 NPM1P13-201ENST00000452663 865 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC119751.4-201ENST00000507498 357 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC113420.1-201ENST00000507903 571 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 MTCYBP37-201ENST00000510642 1133 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 RNU1-103P-201ENST00000516502 125 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 RNU6-1231P-201ENST00000517185 103 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 OR5G4P-201ENST00000525251 760 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 MIR4644-201ENST00000579929 84 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC096947.1-201ENST00000603233 470 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 IGHV3-29-201ENST00000604817 344 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC112220.2-201ENST00000605513 533 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 HMGN2P28-201ENST00000606102 262 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AL592148.2-201ENST00000612210 372 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AC013437.2-201ENST00000639587 677 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 AL035425.3-201ENST00000564206 4996 ntBASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SMIM28A0A1B0GU29 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 ANKRD36P1-201ENST00000344424 659 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 MTND4P3-201ENST00000417829 541 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC005517.2-201ENST00000424673 553 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 GTF2IP3-201ENST00000433887 494 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC025750.2-201ENST00000442609 450 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 RPL37P4-201ENST00000448908 268 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AL136097.1-201ENST00000456945 913 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC104164.3-201ENST00000467363 1258 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 DYNLL1P6-201ENST00000503440 264 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC083906.5-201ENST00000503722 328 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 SCGB1D5P-201ENST00000515134 247 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC010376.1-201ENST00000522101 334 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 DEFB130C-202ENST00000530001 230 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC010928.3-201ENST00000587712 541 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC007566.2-201ENST00000603642 413 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC103710.3-201ENST00000608157 948 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AL158163.2-201ENST00000619110 700 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 GABPAP-201ENST00000419271 1356 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AC000367.1-201ENST00000452711 1766 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 AL157700.1-201ENST00000561973 1432 ntBASIC3.19□□□□□ -1.9
SMIM28A0A1B0GU29 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 U3.6-201ENST00000363622 211 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 RNU6-115P-201ENST00000364310 107 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 RNU6-851P-201ENST00000384565 107 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 RNA5SP274-201ENST00000410484 108 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 EI24P1-201ENST00000416584 867 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AC092634.6-201ENST00000418558 192 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 RPL31P12-201ENST00000422587 358 ntBASIC3.18□□□□□ -1.9
SMIM28A0A1B0GU29 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms