Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ARF4P4-201ENST00000439608 520 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 OR6K5P-201ENST00000447050 945 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AL034418.1-201ENST00000448675 860 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 RNA5SP233-201ENST00000459153 113 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC025033.1-201ENST00000463883 194 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 NDUFA5P5-201ENST00000468361 342 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC109486.1-201ENST00000486833 374 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC096751.1-202ENST00000502691 1067 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC021146.7-201ENST00000509604 775 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 FTH1P21-201ENST00000512179 511 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 RN7SKP31-201ENST00000516354 278 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 SNORA31.18-201ENST00000517043 134 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC107214.2-201ENST00000608204 634 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 OR10AB1P-201ENST00000609613 938 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 MIR6867-201ENST00000610636 67 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 MIR6780A-201ENST00000615089 68 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 MIR6749-201ENST00000617008 69 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC112484.5-201ENST00000624189 228 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC091932.3-201ENST00000624223 323 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 AC087359.1-201ENST00000508335 1740 ntBASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.25□□□□□ -2.21
LINC01558Q9Y6Z2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 RNU1-105P-201ENST00000363470 161 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 RNA5SP242-201ENST00000364171 118 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 U3.20-201ENST00000390909 217 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 U3.29-201ENST00000391296 212 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 CIR1P3-201ENST00000405137 479 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 SUMO2P12-201ENST00000405924 140 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC063979.1-201ENST00000415539 377 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC007560.1-201ENST00000426912 237 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 UBE2V1P1-201ENST00000430836 445 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 OR6C71P-201ENST00000432580 913 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 RPL23AP83-201ENST00000434984 473 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC004022.1-201ENST00000447766 1066 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 MORF4L1P4-201ENST00000450245 976 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 ANKRD26P4-201ENST00000455755 950 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 RPL31P53-201ENST00000457065 348 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC092798.1-201ENST00000458542 409 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 RPS3AP41-201ENST00000462701 778 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC128713.1-201ENST00000471495 306 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 RN7SKP18-201ENST00000516005 275 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 RN7SKP141-201ENST00000516167 338 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 RNA5SP92-201ENST00000516437 110 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 MIR3609-201ENST00000582661 80 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 UBL5P2-201ENST00000583788 219 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 MIR3616-201ENST00000584070 92 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AC073111.2-201ENST00000605657 1075 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 SDR42E1P2-201ENST00000614861 481 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 SDR42E1P4-201ENST00000620894 481 ntBASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
LINC01558Q9Y6Z2 AL354685.2-201ENST00000448218 1447 ntBASIC1.23□□□□□ -2.21
LINC01558Q9Y6Z2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
LINC01558Q9Y6Z2 MTND5P28-201ENST00000438005 1594 ntBASIC1.23□□□□□ -2.21
LINC01558Q9Y6Z2 ANKRD36P1-201ENST00000344424 659 ntBASIC1.23□□□□□ -2.21
LINC01558Q9Y6Z2 RNA5SP456-201ENST00000364002 114 ntBASIC1.23□□□□□ -2.21
LINC01558Q9Y6Z2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.23□□□□□ -2.21
LINC01558Q9Y6Z2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC1.23□□□□□ -2.21
LINC01558Q9Y6Z2 RNU6-198P-201ENST00000384258 104 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms