Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC083843.3-201ENST00000623679 2186 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 DDX10P1-201ENST00000448545 1933 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 OR5P1P-201ENST00000299512 925 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU5A-8P-201ENST00000364102 114 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU6-754P-201ENST00000391166 107 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 CCNG1P1-201ENST00000406783 885 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU2-8P-201ENST00000410727 190 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 CDK8P2-201ENST00000415020 547 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC006366.1-201ENST00000422002 759 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 MTCO1P39-201ENST00000426148 480 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AL138799.3-201ENST00000438968 350 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 RPL17P49-201ENST00000443728 411 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 PHBP16-201ENST00000446318 950 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AL359073.1-201ENST00000448036 403 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 DHFRP3-201ENST00000455595 559 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU7-59P-201ENST00000459101 61 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC079140.3-201ENST00000511111 550 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC108043.1-201ENST00000512696 574 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AP002963.1-201ENST00000530590 184 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 OR5D17P-201ENST00000531492 978 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AL133271.1-201ENST00000538229 291 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 OR4T1P-201ENST00000554933 911 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC233702.9-201ENST00000581528 203 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 VN1R79P-201ENST00000593540 513 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC109347.2-201ENST00000610220 349 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AL355472.4-201ENST00000610233 626 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC006338.2-201ENST00000616864 791 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC007546.2-201ENST00000623996 360 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AL138713.1-201ENST00000624026 2130 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AC095050.2-201ENST00000510748 1458 ntBASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A3BPQ9Y5P4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC005832.2-201ENST00000538921 1430 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 SNORA70.2-201ENST00000364506 135 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 RNA5SP22-201ENST00000365393 109 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 Y_RNA.559-201ENST00000384686 107 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 MIR3065-201ENST00000390137 79 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC097374.1-203ENST00000400783 485 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 RPS3AP24-201ENST00000407896 734 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 RNU2-71P-201ENST00000411395 189 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AL663109.1-201ENST00000411498 844 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 RPS3AP3-201ENST00000411933 242 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 FTH1P1-201ENST00000437933 532 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 RPL21P104-201ENST00000464143 478 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC109327.1-201ENST00000471666 403 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 TMED11P-201ENST00000479478 690 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 RPS3AP50-201ENST00000487064 803 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC091435.1-201ENST00000505442 584 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC109464.2-201ENST00000510242 943 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 RN7SKP122-201ENST00000515923 296 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AP000857.1-201ENST00000532151 543 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC100770.1-201ENST00000532310 322 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC123904.2-201ENST00000548059 300 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC137800.2-201ENST00000574375 120 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC012443.1-201ENST00000605605 231 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms