Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RPS26P40-201ENST00000435209 294 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AL031584.1-201ENST00000447169 754 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AL590365.1-201ENST00000450788 243 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 ACTR3P3-201ENST00000480448 893 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC108078.1-201ENST00000508073 725 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC093809.1-201ENST00000509155 340 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC026412.2-201ENST00000512270 1075 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC026402.1-201ENST00000513642 170 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 OR5BC1P-201ENST00000529327 739 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 MIR3160-1-201ENST00000577972 85 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC005730.3-201ENST00000583067 366 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC016727.1-205ENST00000605437 569 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AP003117.2-201ENST00000606010 545 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC097468.3-201ENST00000607956 456 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 ERCC6-202ENST00000374127 1782 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AL672167.1-204ENST00000641875 3017 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 OR4A15-201ENST00000314706 1035 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RNU6-657P-201ENST00000383904 107 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RNU6-533P-201ENST00000384144 107 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RNU6-761P-201ENST00000384148 107 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RNU6-809P-201ENST00000384461 107 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 GSTA9P-201ENST00000406231 611 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RN7SKP285-201ENST00000410137 318 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC009237.5-201ENST00000414271 501 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC138393.2-201ENST00000414742 246 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 MTATP6P27-201ENST00000416987 621 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RPS12P23-201ENST00000419579 400 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AL139413.1-201ENST00000421309 217 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 Z74021.1-201ENST00000423610 407 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 EIF1P3-201ENST00000423841 334 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 SKP1P1-201ENST00000438081 489 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC105402.2-201ENST00000438503 358 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC114495.1-201ENST00000441274 436 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RPS15AP1-201ENST00000457423 391 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RPL35AP15-201ENST00000468042 339 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RPL21P103-201ENST00000479921 488 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 KCTD9P2-201ENST00000512203 1013 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC006499.2-201ENST00000513470 337 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 RNU6-202P-201ENST00000515998 96 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 ARL2BPP5-201ENST00000523141 481 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC009977.1-201ENST00000586015 570 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 VN1R85P-201ENST00000601587 426 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 BNIP3P11-201ENST00000603878 563 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 Y_RNA.804-201ENST00000615262 101 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC136475.10-201ENST00000620253 385 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 LRRC77P-213ENST00000637727 880 ntBASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.04□□□□□ -1.6
CTDP1Q9Y5B0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 Y_RNA.11-201ENST00000362375 109 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 RNA5SP28-201ENST00000363841 119 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AL121972.1-201ENST00000402023 252 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AL022722.2-201ENST00000402519 180 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 ELOCP14-201ENST00000428070 331 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms