Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC005832.3-201ENST00000537929 631 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC026333.2-201ENST00000542164 106 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 HSPE1P3-201ENST00000559254 309 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 LARP7P2-201ENST00000575306 125 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 MIR3186-201ENST00000577404 85 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 SNORD84-203ENST00000584275 78 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC245036.5-201ENST00000596330 847 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC069304.2-201ENST00000605154 435 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC080013.4-201ENST00000607624 649 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 AC040168.1-201ENST00000623594 991 ntBASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.34□□□□□ -1.87
ATG4BQ9Y4P1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ATG4BQ9Y4P1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
ATG4BQ9Y4P1 AL672296.1-201ENST00000427780 2158 ntBASIC3.34□□□□□ -1.88
ATG4BQ9Y4P1 AF127577.6-201ENST00000623352 2191 ntBASIC3.34□□□□□ -1.88
ATG4BQ9Y4P1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AP001148.1-201ENST00000624124 2359 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 ERHP2-201ENST00000402323 299 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 RNA5SP80-201ENST00000410475 111 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 RNU6-712P-201ENST00000410558 100 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 CYCSP4-201ENST00000429682 331 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 ARF4P2-201ENST00000430209 526 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 USP9YP31-201ENST00000431405 881 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 HMGN2P31-201ENST00000432430 273 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 MTND2P5-201ENST00000432656 1006 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 RPL7P52-201ENST00000449200 742 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 RPL23AP14-201ENST00000468281 468 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC023598.1-201ENST00000472521 361 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC114322.1-201ENST00000506771 926 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 MTCO2P32-201ENST00000514865 403 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 RN7SKP13-201ENST00000515933 244 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 RN7SKP31-201ENST00000516354 278 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 RNA5SP468-201ENST00000516782 93 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 HSPA8P13-201ENST00000523715 472 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AP000619.3-201ENST00000535634 1127 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 DUXAP6-201ENST00000553858 601 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC013470.4-201ENST00000619978 986 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC068787.1-201ENST00000623908 691 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 AC118273.1-201ENST00000525324 3006 ntBASIC3.33□□□□□ -1.88
ATG4BQ9Y4P1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 SNRPEP3-201ENST00000338402 276 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 CYCSP45-201ENST00000402289 315 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 AL136116.1-201ENST00000403591 381 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 SSR1P2-201ENST00000415208 787 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 AC068533.1-201ENST00000418542 415 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 DUTP6-201ENST00000425573 462 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 AL451062.2-201ENST00000427515 271 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 AC092427.1-201ENST00000439177 601 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 MTCO2P25-201ENST00000447065 681 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 SLC31A1P1-201ENST00000451221 567 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 SUMO2P2-201ENST00000456482 255 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 U3.44-201ENST00000458938 192 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 RN7SL330P-201ENST00000469709 307 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 AC034236.1-201ENST00000469891 373 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 FCF1P3-201ENST00000496394 590 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 RNU6-27P-201ENST00000516146 107 ntBASIC3.32□□□□□ -1.88
ATG4BQ9Y4P1 AL139174.1-201ENST00000531489 886 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms