Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PTP4A1P1-201ENST00000420539 515 ntBASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 PTP4A1P7-201ENST00000423476 514 ntBASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 AL590399.6-201ENST00000446396 307 ntBASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 AC239798.3-201ENST00000454459 408 ntBASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 AC092798.1-201ENST00000458542 409 ntBASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 AC091834.1-201ENST00000614543 472 ntBASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 AP003499.2-201ENST00000624100 483 ntBASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RIMBP3Q9UFD9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 MIR3074-201ENST00000384885 81 ntBASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 MIR181B1-201ENST00000385240 110 ntBASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 ATG3P1-201ENST00000419507 911 ntBASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 AC245100.2-201ENST00000454544 1679 ntBASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 VN1R17P-201ENST00000472048 1090 ntBASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 AC061975.8-201ENST00000587058 721 ntBASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 AC126118.1-201ENST00000607744 628 ntBASIC3.6□□□□□ -1.83
RIMBP3Q9UFD9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RIMBP3Q9UFD9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RIMBP3Q9UFD9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.59□□□□□ -1.83
RIMBP3Q9UFD9 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.59□□□□□ -1.83
RIMBP3Q9UFD9 AL592437.1-201ENST00000443781 492 ntBASIC3.59□□□□□ -1.83
RIMBP3Q9UFD9 AC091515.1-201ENST00000548110 679 ntBASIC3.59□□□□□ -1.83
RIMBP3Q9UFD9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.59□□□□□ -1.83
RIMBP3Q9UFD9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.59□□□□□ -1.83
RIMBP3Q9UFD9 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 MIR148B-201ENST00000362252 99 ntBASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 AL591416.1-201ENST00000404015 867 ntBASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 SNORA11.4-201ENST00000408823 129 ntBASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 AL121594.1-201ENST00000475906 575 ntBASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 AL356266.1-201ENST00000623311 483 ntBASIC3.59□□□□□ -1.84
RIMBP3Q9UFD9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 NEAT1-202ENST00000501122 22743 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 RNA5SP210-201ENST00000391034 120 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 AL158825.1-201ENST00000414735 521 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 EI24P1-201ENST00000416584 867 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 SNRPFP2-201ENST00000440710 251 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 AF186190.1-201ENST00000517470 480 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 RFPL1S-203ENST00000539579 330 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 DNAJC19P9-201ENST00000555084 351 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 AL354943.1-201ENST00000572103 781 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 APOOP1-201ENST00000604695 592 ntBASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RIMBP3Q9UFD9 AL136964.1-201ENST00000622038 2990 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 MAPK10-322ENST00000641485 4530 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 AC097714.1-201ENST00000511272 1647 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 MIR221-201ENST00000385135 110 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 RNU2-68P-201ENST00000410878 191 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 AC073136.2-201ENST00000417282 849 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 MTATP6P11-201ENST00000428071 670 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 MRPL50P4-201ENST00000446432 475 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 AC093392.2-201ENST00000450682 337 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 TVP23BP2-201ENST00000455082 615 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 AP002967.1-201ENST00000624203 539 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 AC009487.4-201ENST00000624969 3585 ntBASIC3.57□□□□□ -1.84
RIMBP3Q9UFD9 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 RN7SKP44-201ENST00000363602 316 ntBASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 AC092427.1-202ENST00000430569 476 ntBASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 AL357520.1-201ENST00000441557 453 ntBASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 RPS27P29-201ENST00000463110 252 ntBASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 AC126182.1-201ENST00000478134 357 ntBASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 RAC1P5-201ENST00000512182 576 ntBASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 BMS1P7-201ENST00000602440 1052 ntBASIC3.56□□□□□ -1.84
RIMBP3Q9UFD9 WISP1-OT1-201ENST00000602893 642 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms