Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC090774.1-201ENST00000435925 246 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 Z74696.2-201ENST00000436514 498 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC079448.1-201ENST00000449377 373 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 MTND1P12-201ENST00000455231 147 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 RPS3AP41-201ENST00000462701 778 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 RPS15AP36-201ENST00000492022 382 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 BTF3P13-201ENST00000513224 490 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC114797.1-201ENST00000514003 728 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 Vault.3-201ENST00000516676 95 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 RNA5SP337-201ENST00000517007 109 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 RNU6-1073P-201ENST00000517182 106 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC008489.1-201ENST00000524271 483 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC009117.1-201ENST00000563948 554 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC093249.4-201ENST00000564755 259 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AL391840.1-201ENST00000571144 367 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC091178.1-203ENST00000584586 279 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AC095031.1-201ENST00000623685 672 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 AL136313.1-201ENST00000624804 202 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 OR5AK4P-201ENST00000635912 903 ntBASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIN7CQ9NUP9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 DDX10P1-201ENST00000448545 1933 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AP001486.2-201ENST00000561652 5113 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 TAB3P1-202ENST00000452645 1634 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 OR1S2-201ENST00000302592 978 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 Y_RNA.516-201ENST00000384541 124 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AL590762.2-201ENST00000395798 571 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 RN7SKP159-201ENST00000410657 292 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 RPL7AP73-201ENST00000413490 353 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 PIGFP2-201ENST00000421400 651 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 OR1H1P-201ENST00000448731 937 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AURKAPS2-201ENST00000454983 333 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 RPL23AP56-201ENST00000460778 453 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 RPL9P33-201ENST00000484311 566 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC110792.1-201ENST00000491826 472 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 RPL23AP55-201ENST00000498163 452 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC107401.1-201ENST00000503426 685 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 KCTD9P5-201ENST00000504141 1170 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 RN7SKP276-201ENST00000516242 268 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 DYNLL1P4-201ENST00000549314 266 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 MIR3167-201ENST00000579623 85 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 MIR3667-201ENST00000581025 74 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 RPL7P50-201ENST00000600588 727 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC068790.5-201ENST00000602741 355 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AP000860.1-201ENST00000605250 559 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 MIR98-201ENST00000606724 119 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC004067.1-201ENST00000608733 700 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AL049539.1-201ENST00000611964 459 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC026585.1-201ENST00000619582 524 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC087385.3-201ENST00000620477 187 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 MIR6730-201ENST00000622213 67 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 C2orf27A-204ENST00000623058 969 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC067931.1-201ENST00000624190 671 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AC055839.1-201ENST00000634467 498 ntBASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LIN7CQ9NUP9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms