Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC010329.2-201ENST00000595195 2737 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 MAPK10-304ENST00000641341 3984 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC104118.1-201ENST00000607625 1589 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC006378.2-201ENST00000623178 2476 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG3Q9NT62 RNU6-582P-201ENST00000362989 107 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 Y_RNA.259-201ENST00000364619 101 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 TXNP7-201ENST00000406296 293 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 RNU2-39P-201ENST00000410604 198 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 RN7SKP140-201ENST00000411196 284 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC011933.1-201ENST00000413334 321 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 BOLA3P4-201ENST00000418151 400 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 RPS12P10-201ENST00000427031 377 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 CBX1P4-201ENST00000439415 457 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 RPL23AP16-201ENST00000441715 421 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 RPL26P28-201ENST00000451325 435 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 DHFRP3-201ENST00000455595 559 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 RNU6-1208P-201ENST00000459588 107 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC116533.1-201ENST00000459748 321 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC083798.1-201ENST00000472671 131 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC105137.1-201ENST00000484355 562 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 RNA5SP135-201ENST00000517019 125 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC068790.5-201ENST00000602741 355 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 7SK.7-201ENST00000603504 247 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC004853.1-201ENST00000604902 698 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AC016925.2-201ENST00000605108 242 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 AP006248.2-201ENST00000623309 592 ntBASIC5.92□□□□□ -1.46
ATG3Q9NT62 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATG3Q9NT62 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG3Q9NT62 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
ATG3Q9NT62 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG3Q9NT62 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG3Q9NT62 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG3Q9NT62 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG3Q9NT62 GNG5P1-201ENST00000255500 204 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 RNU6-216P-201ENST00000363282 104 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 RNU1-39P-201ENST00000383897 165 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 Y_RNA.384-201ENST00000383909 102 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 RNU6-505P-201ENST00000384427 107 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 SNORA48.7-201ENST00000391302 135 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 RPL23AP26-201ENST00000412728 464 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AL158073.1-201ENST00000426848 1104 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AL591212.2-201ENST00000433923 257 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 GTF2IP13-201ENST00000438487 386 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 LSM1P1-201ENST00000438629 273 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 MTND6P18-201ENST00000439477 513 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC002553.2-201ENST00000453217 340 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC099563.1-201ENST00000456086 418 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 MTCO1P42-201ENST00000457379 726 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 RPS27AP17-201ENST00000463344 455 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC006390.1-201ENST00000508068 283 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC026782.1-201ENST00000512952 449 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AP003730.1-201ENST00000524605 285 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.91□□□□□ -1.46
ATG3Q9NT62 AL669831.4-202ENST00000590817 238 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 CKS1BP3-201ENST00000600888 237 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 AC103710.3-201ENST00000608157 948 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 LINC00622-201ENST00000562811 1570 ntBASIC5.91□□□□□ -1.46
ATG3Q9NT62 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ATG3Q9NT62 MAPK10-349ENST00000641767 3661 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms