Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 Y_RNA.26-201ENST00000362539 101 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 Y_RNA.60-201ENST00000362831 98 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 RNU1-134P-201ENST00000362935 165 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 Y_RNA.483-201ENST00000384380 101 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 SNORA41-201ENST00000384675 132 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 RNU11-4P-201ENST00000391149 133 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AL109755.1-201ENST00000401791 649 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC096664.2-201ENST00000411843 406 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AL035422.1-201ENST00000414193 397 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 PGBD4P6-201ENST00000421501 610 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 FTH1P25-201ENST00000447665 469 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC092436.3-201ENST00000511788 257 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AP001922.4-201ENST00000526967 290 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC007956.1-201ENST00000555623 542 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC008521.2-201ENST00000591021 259 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC013244.1-201ENST00000604279 193 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC004805.2-201ENST00000605382 482 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AC012603.1-201ENST00000606424 528 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 uc_338.26-201ENST00000612659 160 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 AL512652.1-201ENST00000619006 500 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 SNX18P12-201ENST00000624821 759 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NEUROD4Q9HD90 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 Y_RNA.461-201ENST00000384263 103 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RNU6-434P-201ENST00000384376 107 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RPL21P24-201ENST00000413752 448 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AL133482.1-201ENST00000415988 498 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 UBE2FP1-201ENST00000416536 447 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AL590399.2-201ENST00000427536 309 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RPL35AP22-201ENST00000436855 335 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC007967.1-201ENST00000455422 1159 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RPS23P3-201ENST00000470993 430 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RPS27AP1-201ENST00000475545 471 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC092865.4-201ENST00000477936 615 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RN7SL432P-201ENST00000484057 298 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC004453.1-201ENST00000487895 408 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC026801.1-201ENST00000497178 464 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC105758.1-201ENST00000506038 399 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC096745.1-201ENST00000509945 370 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC100870.1-201ENST00000522035 505 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AP003396.4-201ENST00000527574 265 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 SETP7-201ENST00000552169 453 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC067852.4-201ENST00000590314 478 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AC137590.2-201ENST00000619709 240 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 AP005435.3-201ENST00000531260 3198 ntBASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEUROD4Q9HD90 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms